Literature DB >> 19308699

Lampbrush chromosomes enable study of cohesin dynamics.

Christopher Austin1, Natalya Novikova, Vincent Guacci, Michel Bellini.   

Abstract

The lampbrush chromosomes present in the nuclei of amphibian oocytes offer unique biological approaches for study of the mechanisms that regulate chromatin structure with high spatial resolution. We discuss fundamental aspects of the remarkable organization and plasticity exhibited by lampbrush chromosomes. We then utilize lampbrush chromosomes to characterize the chromosomal distribution and dynamics of cohesin, the four-protein complex (RAD21/MCD1/SCC1, SMC1, SMC3, SCC3/SA2) responsible for sister chromatid cohesion. We find that endogenous SMC3 and newly expressed hRAD21 co-localize on chromosomal axes, sites where sister chromatids are tightly paired. We present evidence suggesting that hRAD21 recruitment to lampbrush chromosomes is modulated by chromosomal SMC1 and SMC3. Notably, using a technique for de novo chromosome assembly, we demonstrate that both SMC3 and hRAD21 are recruited to single, unreplicated lampbrush chromatids. Finally, we used our novel method of analyzing the oocyte nucleus under oil combined with fluorescence recovery after photobleaching, to provide direct evidence that cohesin is highly dynamic at discrete, condensed chromosomal regions. Collectively, these data demonstrate that lampbrush chromosomes provide a unique and powerful tool for combining biochemical and cytological analyses for dissection of complex chromosomal processes.

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Year:  2009        PMID: 19308699     DOI: 10.1007/s10577-008-9015-9

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  61 in total

1.  Cleavage of cohesin by the CD clan protease separin triggers anaphase in yeast.

Authors:  F Uhlmann; D Wernic; M A Poupart; E V Koonin; K Nasmyth
Journal:  Cell       Date:  2000-10-27       Impact factor: 41.582

2.  Chromosomal cohesin forms a ring.

Authors:  Stephan Gruber; Christian H Haering; Kim Nasmyth
Journal:  Cell       Date:  2003-03-21       Impact factor: 41.582

3.  Structure and stability of cohesin's Smc1-kleisin interaction.

Authors:  Christian H Haering; Doris Schoffnegger; Tatsuya Nishino; Wolfgang Helmhart; Kim Nasmyth; Jan Löwe
Journal:  Mol Cell       Date:  2004-09-24       Impact factor: 17.970

Review 4.  Keeping sister chromatids together: cohesins in meiosis.

Authors:  E Revenkova; R Jessberger
Journal:  Reproduction       Date:  2005-12       Impact factor: 3.906

5.  Rec8 phosphorylation and recombination promote the step-wise loss of cohesins in meiosis.

Authors:  Gloria A Brar; Brendan M Kiburz; Yi Zhang; Ji-Eun Kim; Forest White; Angelika Amon
Journal:  Nature       Date:  2006-05-03       Impact factor: 49.962

6.  Nonaqueous isolation of transcriptionally active nuclei from Xenopus oocytes.

Authors:  E Lund; P L Paine
Journal:  Methods Enzymol       Date:  1990       Impact factor: 1.600

7.  Phosphorylation of the cohesin subunit Scc1 by Polo/Cdc5 kinase regulates sister chromatid separation in yeast.

Authors:  G Alexandru; F Uhlmann; K Mechtler; M A Poupart; K Nasmyth
Journal:  Cell       Date:  2001-05-18       Impact factor: 41.582

8.  DNA interaction and dimerization of eukaryotic SMC hinge domains.

Authors:  Allen Chiu; Ekaterina Revenkova; Rolf Jessberger
Journal:  J Biol Chem       Date:  2004-04-14       Impact factor: 5.157

9.  Cut1 is loaded onto the spindle by binding to Cut2 and promotes anaphase spindle movement upon Cut2 proteolysis.

Authors:  K Kumada; T Nakamura; K Nagao; H Funabiki; T Nakagawa; M Yanagida
Journal:  Curr Biol       Date:  1998-05-21       Impact factor: 10.834

10.  Steady-state dynamics of Cajal body components in the Xenopus germinal vesicle.

Authors:  Korie E Handwerger; Christine Murphy; Joseph G Gall
Journal:  J Cell Biol       Date:  2003-02-17       Impact factor: 10.539

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  11 in total

1.  In vitro assembly of physiological cohesin/DNA complexes.

Authors:  Itay Onn; Douglas Koshland
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-13       Impact factor: 11.205

2.  Probing the meiotic mechanism of intergenomic exchanges by genomic in situ hybridization on lampbrush chromosomes of unisexual Ambystoma (Amphibia: Caudata).

Authors:  Ke Bi; James P Bogart
Journal:  Chromosome Res       Date:  2010-04-01       Impact factor: 5.239

3.  The recruitment of the U5 snRNP to nascent transcripts requires internal loop 1 of U5 snRNA.

Authors:  Rebecca Kim; Joshua Paschedag; Natalya Novikova; Michel Bellini
Journal:  Chromosome Res       Date:  2012-12       Impact factor: 5.239

4.  Chromomeres revisited.

Authors:  Herbert C Macgregor
Journal:  Chromosome Res       Date:  2012-12       Impact factor: 5.239

5.  Cohesin proteins load sequentially during prophase I in tomato primary microsporocytes.

Authors:  Huanyu Qiao; Leslie D Lohmiller; Lorinda K Anderson
Journal:  Chromosome Res       Date:  2011-01-14       Impact factor: 5.239

6.  Facioscapulohumeral muscular dystrophy region gene 1 is a dynamic RNA-associated and actin-bundling protein.

Authors:  Chia-Yun Jessica Sun; Silvana van Koningsbruggen; Steven W Long; Kirsten Straasheijm; Rinse Klooster; Takako I Jones; Michel Bellini; Lyne Levesque; William M Brieher; Silvère M van der Maarel; Peter L Jones
Journal:  J Mol Biol       Date:  2011-06-15       Impact factor: 5.469

7.  Novel domains in the hnRNP G/RBMX protein with distinct roles in RNA binding and targeting nascent transcripts.

Authors:  Rasha Kanhoush; Brent Beenders; Caroline Perrin; Jacques Moreau; Michel Bellini; May Penrad-Mobayed
Journal:  Nucleus       Date:  2010 Jan-Feb       Impact factor: 4.197

8.  Association of modified cytosines and the methylated DNA-binding protein MeCP2 with distinctive structural domains of lampbrush chromatin.

Authors:  Garry T Morgan; Peter Jones; Michel Bellini
Journal:  Chromosome Res       Date:  2012-12       Impact factor: 5.239

9.  A role for SOX9 in post-transcriptional processes: insights from the amphibian oocyte.

Authors:  M Penrad-Mobayed; C Perrin; D L'Hôte; V Contremoulins; J-A Lepesant; B Boizet-Bonhoure; F Poulat; X Baudin; R A Veitia
Journal:  Sci Rep       Date:  2018-05-08       Impact factor: 4.379

10.  Imaging the dynamics of transcription loops in living chromosomes.

Authors:  Garry T Morgan
Journal:  Chromosoma       Date:  2018-04-03       Impact factor: 4.316

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