Literature DB >> 19307190

Phenotypic, genetic and genomic consequences of natural and synthetic polyploidization of Nicotiana attenuata and Nicotiana obtusifolia.

S Anssour1, T Krügel, T F Sharbel, H P Saluz, G Bonaventure, I T Baldwin.   

Abstract

BACKGROUND AND METHODS: Polyploidy results in genetic turmoil, much of which is associated with new phenotypes that result in speciation. Five independent lines of synthetic allotetraploid N. x obtusiata (N x o) were created from crosses between the diploid N. attenuata (Na) (male) and N. obtusifolia (No) (female) and the autotetraploids of Na (NaT) and No (NoT) were synthesized. Their genetic, genomic and phenotypic changes were then compared with those of the parental diploid species (Na and No) as well as to the natural allotetraploids, N. quadrivalvis (Nq) and N. clevelandii (Nc), which formed 1 million years ago from crosses between ancient Na and No. KEY
RESULTS: DNA fingerprinting profiles (by UP-PCR) revealed that the five N x o lines shared similar but not identical profiles. Both synthetic and natural polyploidy showed a dosage effect on genome size (as measured in seeds); however, only Nq was associated with a genome upsizing. Phenotypic analysis revealed that at the cellular level, N x o lines had phenotypes intermediate of the parental phenotypes. Both allo- and autotetraploidization had a dosage effect on seed and dry biomass (except for NaT), but not on stalk height at first flower. Nc showed paternal (Na) cellular phenotypes but inherited maternal (No) biomass and seed mass, whereas Nq showed maternal (No) cellular phenotypes but inherited paternal (Na) biomass and seed mass patterns. Principal component analysis grouped Nq with N x o lines, due to similar seed mass, stalk height and genome size. These traits separated Nc, No and Na from Nq and N x o lines, whereas biomass distinguished Na from N x o and Nq lines, and NaT clustered closer to Nq and N x o lines than to Na.
CONCLUSIONS: Both allo- and autotetraploidy induce considerable morphological, genetic and genomic changes, many of which are retained by at least one of the natural polyploids. It is proposed that both natural and synthetic polyploids are well suited for studying the evolution of adaptive responses.

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Year:  2009        PMID: 19307190      PMCID: PMC2685307          DOI: 10.1093/aob/mcp058

Source DB:  PubMed          Journal:  Ann Bot        ISSN: 0305-7364            Impact factor:   4.357


  47 in total

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Review 2.  Yesterday's polyploids and the mystery of diploidization.

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Authors:  K Song; P Lu; K Tang; T C Osborn
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4.  Polyploid formation created unique avenues for response to selection in Gossypium (cotton).

Authors:  C Jiang; R J Wright; K M El-Zik; A H Paterson
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5.  Genomewide nonadditive gene regulation in Arabidopsis allotetraploids.

Authors:  Jianlin Wang; Lu Tian; Hyeon-Se Lee; Ning E Wei; Hongmei Jiang; Brian Watson; Andreas Madlung; Thomas C Osborn; R W Doerge; Luca Comai; Z Jeffrey Chen
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6.  Identification of a universally primed-PCR-derived sequence-characterized amplified region marker for an antagonistic strain of Clonostachys rosea and development of a strain-specific PCR detection assay.

Authors:  S A Bulat; M Lübeck; I A Alekhina; D F Jensen; I M Knudsen; P S Lübeck
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7.  Innovation in anti-herbivore defense systems during neopolypoloidy - the functional consequences of instantaneous speciation.

Authors:  Ian S Pearse; Tamara Krügel; Ian T Baldwin
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8.  Characterization of the Nicotiana tabacum L. genome by molecular cytogenetics.

Authors:  A Kenton; A S Parokonny; Y Y Gleba; M D Bennett
Journal:  Mol Gen Genet       Date:  1993-08

9.  Species-specific evolution of telomeric and rDNA repeats in the tobacco composite genome.

Authors:  A Kovařik; J Fajkus; B Koukalová; M Bezděk
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Authors:  K Yoong Lim; Douglas E Soltis; Pamela S Soltis; Jennifer Tate; Roman Matyasek; Hana Srubarova; Ales Kovarik; J Chris Pires; Zhiyong Xiong; Andrew R Leitch
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1.  Developmental, cytological and transcriptional analysis of autotetraploid Arabidopsis.

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2.  Somatic hybrid plants of Nicotiana x sanderae (+) N. debneyi with fungal resistance to Peronospora tabacina.

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3.  Genomically biased accumulation of seed storage proteins in allopolyploid cotton.

Authors:  Guanjing Hu; Norma L Houston; Dharminder Pathak; Linnea Schmidt; Jay J Thelen; Jonathan F Wendel
Journal:  Genetics       Date:  2011-09-06       Impact factor: 4.562

4.  Variation in antiherbivore defense responses in synthetic Nicotiana allopolyploids correlates with changes in uniparental patterns of gene expression.

Authors:  Samir Anssour; Ian T Baldwin
Journal:  Plant Physiol       Date:  2010-06-04       Impact factor: 8.340

5.  Gene-expression novelty in allopolyploid cotton: a proteomic perspective.

Authors:  Guanjing Hu; Jin Koh; Mi-Jeong Yoo; Sixue Chen; Jonathan F Wendel
Journal:  Genetics       Date:  2015-03-02       Impact factor: 4.562

6.  Earliest evidence for human use of tobacco in the Pleistocene Americas.

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7.  Characteristic alatoid 'cineole cassette' monoterpene synthase present in Nicotiana noctiflora.

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8.  The effect of polyploidy and hybridization on the evolution of floral colour in Nicotiana (Solanaceae).

Authors:  Elizabeth W McCarthy; Sarah E J Arnold; Lars Chittka; Steven C Le Comber; Robert Verity; Steven Dodsworth; Sandra Knapp; Laura J Kelly; Mark W Chase; Ian T Baldwin; Aleš Kovařík; Corinne Mhiri; Lin Taylor; Andrew R Leitch
Journal:  Ann Bot       Date:  2015-05-15       Impact factor: 4.357

Review 9.  A Review of Unreduced Gametes and Neopolyploids in Alfalfa: How to Fill the Gap between Well-Established Meiotic Mutants and Next-Generation Genomic Resources.

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10.  Stochastic changes affect Solanum wild species following autopolyploidization.

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