| Literature DB >> 19298652 |
Cynthia A Bonville1, Caroline M Percopo, Kimberly D Dyer, Jiliang Gao, Calman Prussin, Barbara Foster, Helene F Rosenberg, Joseph B Domachowske.
Abstract
BACKGROUND: We have shown previously that acute infection with the respiratory pathogen, pneumonia virus of mice (PVM), results in local production of the proinflammatory chemokine, CCL3, and that neutrophil recruitment in response to PVM infection is reduced dramatically in CCL3 -/- mice.Entities:
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Year: 2009 PMID: 19298652 PMCID: PMC2662797 DOI: 10.1186/1471-2172-10-14
Source DB: PubMed Journal: BMC Immunol ISSN: 1471-2172 Impact factor: 3.615
Figure 1(A) Expression of transcripts in mouse lung tissue in response to PVM infection: IFN-γ and IFN-γ correlating profiles. Baseline expression in uninfected mice (day 0) is set at 1.0 and normalized expression (per gene, per chip) is shown for days 1 – 7, 10, 14, 21 and 28 after inoculation. Profiles of 203 transcripts with patterns that correlate with that the profile of IFN-γ (0.900 to 0.969) are shown in yellow to red, respectively, and identified by name in Table 1. The expression profile of CCL3 (MIP-1α), a chemokine crucial for neutrophil recruitment in response to PVM infection, is overdrawn with a blue line (correlation 0.965). (B) Correlation of IFN-γ and CCL3 protein levels in individual PVM-infected mice. IFN-γ and CCL3 detected by ELISA in lung tissue homogenates from individual mice days 0 – 28 after inoculation with 30 pfu PVM (n = 43) are as shown. (C) IFNγ. Total and IFNγ+ NK cells, CD4+ T cells, and CD8+ T cells (± sd) detected per lung on day 6 after inoculation with 10 pfu PVM.
Expression profiles that correlate with IFN-γ in PVM-infected mouse lung tissue.
| Interferon-γ | Ifng | 1.000 | |
| Interferon inducible protein 1 | Ifi1 | 0.961 | |
| Interferon-stimulated protein | Isg20 | 0.953 | |
| Interferon-γ induced GTPase | Igtp | 0.953 | |
| Interferon-induced transmembrane protein 6 | Ifitm6 | 0.950 | |
| CXC chemokine ligand 11 (IP-9) | Cxcl11 | 0.949 | |
| Interferon inducible protein 47 | Ifi47 | 0.940 | |
| Interferon activatible protein 203 | Ifi203 | 0.932 | |
| Interferon activated gene 205 | Ifi205 | 0.929 | |
| Interferon induced protein with tetratricopeptide repeats 1 | Ifit1 | 0.929 | |
| Interferon consensus sequence binding protein 1 | Icsbp1 | 0.926 | |
| Interferon regulatory factor 7 | Irf7 | 0.922 | |
| Interferon activated gene 205 | Ifi205 | 0.916 | |
| Interferon regulatory factor 5 | Irf5 | 0.914 | |
| Interferon activated gene 203 | Ifi203 | 0.910 | |
| Interferon-induced protein with tetratricopeptide repeats, 3 | Ifit3 | 0.909 | |
| Interferon induced protein with tetratricopeptide repeats 2 | Ifit2 | 0.901 | |
| CC Chemokine ligand 3 (MIP-1α) | Ccl3 | 0.965 | |
| Toll-like receptor 2 | Tlr2 | 0.959 | |
| Interleukin-13 receptor alpha 1 | Il13ra1 | 0.959 | |
| Suppressor of cytokine signaling 3 | Socs3 | 0.951 | |
| Galectin-9 | Lgals9 | 0.948 | |
| Interleukin-1 receptor antagonist | Il1rn | 0.947 | |
| Regulator of G-protein signaling 19 interacting protein 1 | Rgs19ip1 | 0.943 | |
| Interleukin-6 | Il6 | 0.937 | |
| CD244 natural killer cell receptor 2B4 | Cd244 | 0.928 | |
| CSF2 receptor | Csf2rb2 | 0.928 | |
| Fc receptor, IgG, high affinity, I | Fcgr1 | 0.926 | |
| CC chemokine receptor 1 | Ccr1 | 0.926 | |
| Pentaxin-related gene | Ptx3 | 0.926 | |
| CXC chemokine ligand 13 (BLC) | Cxcl13 | 0.921 | |
| CXC chemokine ligand 2 (MIP-2α) | Cxcl2 | 0.919 | |
| CXC chemokine ligand 5 (ENA-78) | Cxcl1 | 0.914 | |
| Arginase II | Arg2 | 0.904 | |
| Signal transducer and activator of transcription 1 | Stat1 | 0.904 | |
| Regulator of G-protein signaling 1 | Rgs1 | 0.903 | |
| CC chemokine receptor-like 2 | Ccrl2 | 0.902 | |
| Membrane-spanning 4-domains, subfamily A, member 8A | Ms4a8a | 0.969 | |
| Chondroitin sulfate proteoglycan 2 | Cspg2 | 0.963 | |
| Fas death domain-associated protein | Daxx | 0.960 | |
| O-acyltransferase domain containing 1 | Oact1 | 0.960 | |
| Mitogen activated protein kinase kinase kinase kinase 1 | Map4k1 | 0.960 | |
| Lymphocyte cytosolic protein 2 | Lcp2 | 0.959 | |
| Solute carrier family 15, member 3 | Slc15a3 | 0.956 | |
| Indoleamine-pyrrole 2,3 dioxygenase | Indo | 0.954 | |
| Proteosome subunit beta type 9 | Tap1 | 0.952 | |
| Phospholipase A1 member A | Pla1a | 0.949 | |
| Methylene tetrahydrofolate dehydrogenase | Mthfd2 | 0.949 | |
| Pre-B colony enhancing factor 1 | Pbef1 | 0.948 | |
| Thioredoxin reductase 1 | Txnrd1 | 0.948 | |
| CGG triplet repeat binding protein 1 | Cggbp1 | 0.945 | |
| Sphingosine kinase 1 | Sphk1 | 0.944 | |
| Pyrophosphatase | Pyp | 0.944 | |
| 2'-5' oligoadenylate synthetase 1G | Oas1g | 0.943 | |
| Ubiquitin D | Ubd | 0.943 | |
| Apolipoprotein D | Apod | 0.940 | |
| Membrane-spanning 4-domains, subfamily A, member 4C | Ms4a4b | 0.936 | |
| AT rich interacting domain 5A | Arid5a | 0.935 | |
| Hemopoietic cell kinase | Hck | 0.933 | |
| Histocompatibility 2, complement component factor B | H2-Bf | 0.933 | |
| ATP binding cassette | Abcc5 | 0.933 | |
| Cholesterol 25-hydroxylase | Ch25h | 0.932 | |
| BING 4 protein | Bing4 | 0.932 | |
| Thymidylate kinase, LPS inducible | Tyki | 0.930 | |
| Tripartite motif protein 30 | Trim30 | 0.929 | |
| Tissue specific transplantation antigen 30 | Tsta3 | 0.929 | |
| Syndecan binding protein | Sdcbp | 0.928 | |
| Prostaglandin-endoperoxide synthase 2 | Ptgs2 | 0.926 | |
| Traf binding protein | T2bp | 0.925 | |
| Two pore segment channel 2 | Tpcn2 | 0.925 | |
| Early growth response 2 | Egr2 | 0.925 | |
| GLI pathogenesis-related 2 | Glipr2 | 0.925 | |
| Cytochrome p450, family 7, subfamily b | Cyp7b1 | 0.924 | |
| Rab20, Ras oncogene | Rab20 | 0.923 | |
| Solute carrier 39 | Slc39a14 | 0.922 | |
| Dual specificity phosphatase 3 | Dusp3 | 0.922 | |
| Ribosome binding protein 1 | Rrbp1 | 0.922 | |
| Spermidine synthase | Srm | 0.921 | |
| Ubiquitin-specific protease 18 | Usp18 | 0.920 | |
| Lipocalin | Lcn2 | 0.920 | |
| Jun-B oncogene | Junb | 0.919 | |
| Guanylate nucleotide binding protein 3 | Gbp3 | 0.919 | |
| Pre-B cell colony-enhancing factor 1 | Pbef1 | 0.917 | |
| Membrane-spanning 4-domains subfamily A, member 6B | Ms4a6b | 0.917 | |
| SLAM family member 7 | Slamf7 | 0.915 | |
| Ras and Rab interactor 1 | Rin1 | 0.915 | |
| Class II transactivator | C2ta | 0.913 | |
| Myxovirus resistance I | Mx1 | 0.910 | |
| Chloride channel calcium activated 2 | Clca1 | 0.910 | |
| Rap2C, member of RAS oncogene family | Rap2c | 0.910 | |
| Tumor necrosis factor, alpha induced protein 2 | Tnfaip2 | 0.908 | |
| SLAM family member 8 | Slamf8 | 0.908 | |
The microarray analysis software package, Genespring GX 7.3 'find similar' function was used to inspect all transcript profiles for patterns related to that displayed by IFN-γ. The minimum correlation considered to be similar was set at 0.900 (see Figure 1A).
Figure 2Neutrophil recruitment in response to PVM infection is diminished in IFN-γR gene-deleted mice. (A) Neutrophils detected in BAL fluid 5 days after inoculation; hpf, high power field; *p < 0.001;(B) Detection of CCL3 in BAL fluid; *p < 0.001 (C) Virus copy number detected in lung tissue determined by quantitative RT-PCR.
Figure 3Comparison of wild type and IFNγR gene-deleted neutrophils. (A) Expression of CCR1 transcript in wild type and IFNγR gene-deleted neutrophils (n = 9 and 6 independent samples, respectively) determined by quantitative RT-PCR; horizontal line denotes mean copy number. (B) Calcium flux (RFU) measured in response to increasing concentrations (0 – 500 nM) of CCL3.
Figure 4Heterologous expression of CCL3 in mouse lungs. (A) Detection of immunoreactive CCL3 in lungs of mice on day 9 after challenge via intranasal inoculation with the CCL3 overexpression vector (vCCL3) or control vector (vctrl), *p < 0.01. (B) Lung tissue from mice challenged with vCCL3, immunohistochemical localization of CCL3 within bronchiolar epithelial cells (at arrows), (C) Lung tissue from mice challenged with vctrl.
Figure 5Neutrophil recruitment in response to CCL3 is ablated in IFN-γ gene-deleted mice. (A) Neutrophils detected in BAL fluid of IFNγ gene-deleted (IFNγ -/-) mice (+vctrl +med (medium; RPMI + 10% FCS vehicle control); open bar), + IFNγ (+vctrl + IFNγ, grey-shaded bar), +vCCL3 +med (black bar), or +vCCL3 + IFNγ (black-shaded bar); *p < 0.01 vs. other conditions, day 9 after challenge with vCCL3 or vctrl. (B, C) Microscopic images of lung tissue from IFN-γ -/- mice challenged with (B) vCCL3 + med or (C) vCCL3 + IFNγ; original magnification, 20×. Inset, original magnification 63×, documenting neutrophil recruitment. (D) Change in body weight in response to CCL3 overexpression ± IFN-γ; *p < 0.01 at time points shown.