Literature DB >> 19285746

The complex relationship of gene duplication and essentiality.

Takashi Makino1, Karsten Hokamp, Aoife McLysaght.   

Abstract

In yeast and worm, duplicate genes overlap in function so that deleting one of a pair from the genome is less likely to be lethal than deleting a singleton gene. By contrast, previous analyses showed that mouse duplicate genes were as essential as singletons. We show that the relationship between gene duplication and essentiality is complex in multicellular organisms, with developmental genes and genes that were duplicated by whole genome duplication being more essential than other duplicated genes.

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Year:  2009        PMID: 19285746     DOI: 10.1016/j.tig.2009.03.001

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  55 in total

1.  Eukaryotic genes of archaebacterial origin are more important than the more numerous eubacterial genes, irrespective of function.

Authors:  James A Cotton; James O McInerney
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-17       Impact factor: 11.205

2.  Ohnologs in the human genome are dosage balanced and frequently associated with disease.

Authors:  Takashi Makino; Aoife McLysaght
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-03       Impact factor: 11.205

3.  Identification and characterization of essential genes in the human genome.

Authors:  Tim Wang; Kıvanç Birsoy; Nicholas W Hughes; Kevin M Krupczak; Yorick Post; Jenny J Wei; Eric S Lander; David M Sabatini
Journal:  Science       Date:  2015-10-15       Impact factor: 47.728

4.  Gene Duplicability of Core Genes Is Highly Consistent across All Angiosperms.

Authors:  Zhen Li; Jonas Defoort; Setareh Tasdighian; Steven Maere; Yves Van de Peer; Riet De Smet
Journal:  Plant Cell       Date:  2016-01-07       Impact factor: 11.277

5.  Ohnologs are overrepresented in pathogenic copy number mutations.

Authors:  Aoife McLysaght; Takashi Makino; Hannah M Grayton; Maria Tropeano; Kevin J Mitchell; Evangelos Vassos; David A Collier
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-24       Impact factor: 11.205

6.  Functional compensation by duplicated genes in mouse.

Authors:  Han Liang; Wen-Hsiung Li
Journal:  Trends Genet       Date:  2009-09-25       Impact factor: 11.639

7.  Duplicability of self-interacting human genes.

Authors:  Asa Pérez-Bercoff; Takashi Makino; Aoife McLysaght
Journal:  BMC Evol Biol       Date:  2010-05-28       Impact factor: 3.260

8.  Evolutionary persistence of functional compensation by duplicate genes in Arabidopsis.

Authors:  Kousuke Hanada; Takashi Kuromori; Fumiyoshi Myouga; Tetsuro Toyoda; Wen-Hsiung Li; Kazuo Shinozaki
Journal:  Genome Biol Evol       Date:  2009-10-29       Impact factor: 3.416

9.  Ordered structure of the transcription network inherited from the yeast whole-genome duplication.

Authors:  Diana Fusco; Luigi Grassi; Bruno Bassetti; Michele Caselle; Marco Cosentino Lagomarsino
Journal:  BMC Syst Biol       Date:  2010-06-03

10.  Modification of gene duplicability during the evolution of protein interaction network.

Authors:  Matteo D'Antonio; Francesca D Ciccarelli
Journal:  PLoS Comput Biol       Date:  2011-04-07       Impact factor: 4.475

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