Literature DB >> 19279641

Transcriptomics: The digital generation.

Nathan Blow.   

Abstract

Mesh:

Year:  2009        PMID: 19279641     DOI: 10.1038/458239a

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


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  6 in total

1.  The DNA sequence of human chromosome 22.

Authors:  I Dunham; N Shimizu; B A Roe; S Chissoe; A R Hunt; J E Collins; R Bruskiewich; D M Beare; M Clamp; L J Smink; R Ainscough; J P Almeida; A Babbage; C Bagguley; J Bailey; K Barlow; K N Bates; O Beasley; C P Bird; S Blakey; A M Bridgeman; D Buck; J Burgess; W D Burrill; K P O'Brien
Journal:  Nature       Date:  1999-12-02       Impact factor: 49.962

2.  The transcriptional activity of human Chromosome 22.

Authors:  John L Rinn; Ghia Euskirchen; Paul Bertone; Rebecca Martone; Nicholas M Luscombe; Stephen Hartman; Paul M Harrison; F Kenneth Nelson; Perry Miller; Mark Gerstein; Sherman Weissman; Michael Snyder
Journal:  Genes Dev       Date:  2003-02-15       Impact factor: 11.361

3.  Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs.

Authors:  John L Rinn; Michael Kertesz; Jordon K Wang; Sharon L Squazzo; Xiao Xu; Samantha A Brugmann; L Henry Goodnough; Jill A Helms; Peggy J Farnham; Eran Segal; Howard Y Chang
Journal:  Cell       Date:  2007-06-29       Impact factor: 41.582

4.  A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome.

Authors:  Marc Sultan; Marcel H Schulz; Hugues Richard; Alon Magen; Andreas Klingenhoff; Matthias Scherf; Martin Seifert; Tatjana Borodina; Aleksey Soldatov; Dmitri Parkhomchuk; Dominic Schmidt; Sean O'Keeffe; Stefan Haas; Martin Vingron; Hans Lehrach; Marie-Laure Yaspo
Journal:  Science       Date:  2008-07-03       Impact factor: 47.728

5.  Mapping and quantifying mammalian transcriptomes by RNA-Seq.

Authors:  Ali Mortazavi; Brian A Williams; Kenneth McCue; Lorian Schaeffer; Barbara Wold
Journal:  Nat Methods       Date:  2008-05-30       Impact factor: 28.547

6.  Stem cell transcriptome profiling via massive-scale mRNA sequencing.

Authors:  Nicole Cloonan; Alistair R R Forrest; Gabriel Kolle; Brooke B A Gardiner; Geoffrey J Faulkner; Mellissa K Brown; Darrin F Taylor; Anita L Steptoe; Shivangi Wani; Graeme Bethel; Alan J Robertson; Andrew C Perkins; Stephen J Bruce; Clarence C Lee; Swati S Ranade; Heather E Peckham; Jonathan M Manning; Kevin J McKernan; Sean M Grimmond
Journal:  Nat Methods       Date:  2008-05-30       Impact factor: 28.547

  6 in total
  34 in total

1.  Efficient and graded gene expression in glia and neurons of primary cerebellar cultures transduced by lentiviral vectors.

Authors:  Sujeet Kumar; Katrin Zimmermann; Hiroyuki Hioki; Alexander Pfeifer; Stephan L Baader
Journal:  Histochem Cell Biol       Date:  2014-08-26       Impact factor: 4.304

2.  Digital gene expression signatures for maize development.

Authors:  Andrea L Eveland; Namiko Satoh-Nagasawa; Alexander Goldshmidt; Sandra Meyer; Mary Beatty; Hajime Sakai; Doreen Ware; David Jackson
Journal:  Plant Physiol       Date:  2010-09-10       Impact factor: 8.340

3.  Analysis of HIV-1 expression level and sense of transcription by high-throughput sequencing of the infected cell.

Authors:  Gregory Lefebvre; Sébastien Desfarges; Frédéric Uyttebroeck; Miguel Muñoz; Niko Beerenwinkel; Jacques Rougemont; Amalio Telenti; Angela Ciuffi
Journal:  J Virol       Date:  2011-04-20       Impact factor: 5.103

4.  Improving RNA-Seq Precision with MapAl.

Authors:  Paweł P Labaj; Bryan E Linggi; H Steven Wiley; David P Kreil
Journal:  Front Genet       Date:  2012-04-02       Impact factor: 4.599

5.  Next-generation sequencing-based transcriptome profiling analysis of Pohlia nutans reveals insight into the stress-relevant genes in Antarctic moss.

Authors:  Shenghao Liu; Nengfei Wang; Pengying Zhang; Bailin Cong; Xuezheng Lin; Shouqiang Wang; Guangmin Xia; Xiaohang Huang
Journal:  Extremophiles       Date:  2013-03-27       Impact factor: 2.395

6.  De novo characterization of a whitefly transcriptome and analysis of its gene expression during development.

Authors:  Xiao-Wei Wang; Jun-Bo Luan; Jun-Min Li; Yan-Yuan Bao; Chuan-Xi Zhang; Shu-Sheng Liu
Journal:  BMC Genomics       Date:  2010-06-24       Impact factor: 3.969

7.  Physiological and transcriptional responses of two contrasting Populus clones to nitrogen stress.

Authors:  Xiaoli Wang; Xiaodong Li; Sheng Zhang; Helena Korpelainen; Chunyang Li
Journal:  Tree Physiol       Date:  2016-04-19       Impact factor: 4.196

8.  Enabling systems biology approaches through microfabricated systems.

Authors:  Mei Zhan; Loice Chingozha; Hang Lu
Journal:  Anal Chem       Date:  2013-10-01       Impact factor: 6.986

9.  Transcriptional profile of Taxus chinensis cells in response to methyl jasmonate.

Authors:  Shu-tao Li; Peng Zhang; Meng Zhang; Chun-hua Fu; Chun-fang Zhao; Yan-shan Dong; An-yuan Guo; Long-jiang Yu
Journal:  BMC Genomics       Date:  2012-07-02       Impact factor: 3.969

10.  MicroRNA and piRNA profiles in normal human testis detected by next generation sequencing.

Authors:  Qingling Yang; Juan Hua; Liu Wang; Bo Xu; Huan Zhang; Nan Ye; Zhiqiang Zhang; Dexin Yu; Howard J Cooke; Yuanwei Zhang; Qinghua Shi
Journal:  PLoS One       Date:  2013-06-24       Impact factor: 3.240

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