Literature DB >> 19277741

Morphological quantification of filamentous fungal development using membrane immobilization and automatic image analysis.

David J Barry1, Cecilia Chan, Gwilym A Williams.   

Abstract

Mycelial morphology is a critically important process property in industrial fermentations of filamentous micro-organisms, as particular phenotypes are associated with maximum productivity. However, the accurate quantification of complex morphologies still represents a significant challenge in elucidating this relationship. A system has been developed for high-resolution characterisation of filamentous fungal growth on a solid substrate, using membrane immobilization and fully-automatic plug-ins developed for the public domain, Java-based, image-processing software, ImageJ. The system has been used to quantify the microscopic development of Aspergillus oryzae on malt agar, by measuring spore projected area and circularity, the total length of a hyphal element, the number of tips per element, and the hyphal growth unit. Two different stages of growth are described, from the swelling of a population of conidiospores up to fully developed, branched hyphae 24 h after inoculation. Spore swelling expressed as an increase in mean equivalent spore diameter was found to be approximately linear with time. Widespread germination of spores was observed by 8 h after inoculation. From approximately 12 h, the number of tips was found to increase exponentially. The specific growth rate of a population of hyphae was calculated as approximately 0.24-0.27 h(-1). A wide variation in growth kinetics was found within the population. The robustness of the image-analysis system was verified by testing the effect of small variations in the input data.

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Year:  2009        PMID: 19277741     DOI: 10.1007/s10295-009-0552-9

Source DB:  PubMed          Journal:  J Ind Microbiol Biotechnol        ISSN: 1367-5435            Impact factor:   3.346


  36 in total

1.  On-line study of growth kinetics of single hyphae of Aspergillus oryzae in a flow-through cell.

Authors:  T Christiansen; A B Spohr; J Nielsen
Journal:  Biotechnol Bioeng       Date:  1999-04-20       Impact factor: 4.530

2.  Metabolic engineering of the morphology of Aspergillus oryzae by altering chitin synthesis.

Authors:  Christian Müller; Mhairi McIntyre; Kim Hansen; Jens Nielsen
Journal:  Appl Environ Microbiol       Date:  2002-04       Impact factor: 4.792

Review 3.  Fungal morphology and metabolite production in submerged mycelial processes.

Authors:  Maria Papagianni
Journal:  Biotechnol Adv       Date:  2004-01       Impact factor: 14.227

4.  Effects of increased impeller power in a production-scale Aspergillus oryzae fermentation.

Authors:  Zheng Jian Li; Vivek Shukla; Kevin S Wenger; Andrew P Fordyce; Annemarie Gade Pedersen; Mark R Marten
Journal:  Biotechnol Prog       Date:  2002 May-Jun

Review 5.  Proteomics of filamentous fungi.

Authors:  Yonghyun Kim; M P Nandakumar; Mark R Marten
Journal:  Trends Biotechnol       Date:  2007-08-03       Impact factor: 19.536

6.  The growth unit of the mould Geotrichum candidum.

Authors:  I Y Caldwell; A P Trinci
Journal:  Arch Mikrobiol       Date:  1973

7.  A glucoamylase::GFP gene fusion to study protein secretion by individual hyphae of Aspergillus niger.

Authors:  C L Gordon; D B Archer; D J Jeenes; J H Doonan; B Wells; A P Trinci; G D Robson
Journal:  J Microbiol Methods       Date:  2000-09       Impact factor: 2.363

Review 8.  Advances in the production of human therapeutic proteins in yeasts and filamentous fungi.

Authors:  Tillman U Gerngross
Journal:  Nat Biotechnol       Date:  2004-11       Impact factor: 54.908

9.  Image analysis of hyphal morphogenesis in Saprolegniaceae (Oomycetes).

Authors:  Javier Diéguez-Uribeondo; Gerhard Gierz; Salomon Bartnicki-García
Journal:  Fungal Genet Biol       Date:  2004-03       Impact factor: 3.495

10.  Influence of culture conditions on mycelial structure and polygalacturonase synthesis of Aspergillus niger.

Authors:  H Hermersdörfer; A Leuchtenberger; C Wardsack; H Ruttloff
Journal:  J Basic Microbiol       Date:  1987       Impact factor: 2.281

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  5 in total

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Authors:  Xiangyu Zhang; Guanghao Wang; Xiaojian Qu; Mengmeng Wang; Huan Guo; Lu Zhang; Tingdong Li; Yajuan Wang; Hong Zhang; Wanquan Ji
Journal:  Planta       Date:  2022-02-08       Impact factor: 4.116

2.  Temperature-responsive regulation of the fermentation of hypocrellin A by Shiraia bambusicola (GDMCC 60438).

Authors:  Yongdi Wen; Baosheng Liao; Xiaoxiao Yan; Zhenqiang Wu; Xiaofei Tian
Journal:  Microb Cell Fact       Date:  2022-07-05       Impact factor: 6.352

3.  Live Monitoring and Analysis of Fungal Growth, Viability, and Mycelial Morphology Using the IncuCyte NeuroTrack Processing Module.

Authors:  Sebastian Wurster; Pappanaicken R Kumaresan; Nathaniel D Albert; Paul J Hauser; Russell E Lewis; Dimitrios P Kontoyiannis
Journal:  mBio       Date:  2019-05-28       Impact factor: 7.867

4.  A Comprehensive Survey with Quantitative Comparison of Image Analysis Methods for Microorganism Biovolume Measurements.

Authors:  Jiawei Zhang; Chen Li; Md Mamunur Rahaman; Yudong Yao; Pingli Ma; Jinghua Zhang; Xin Zhao; Tao Jiang; Marcin Grzegorzek
Journal:  Arch Comput Methods Eng       Date:  2022-09-06       Impact factor: 8.171

5.  HyphaTracker: An ImageJ toolbox for time-resolved analysis of spore germination in filamentous fungi.

Authors:  Michael Brunk; Sebastian Sputh; Sören Doose; Sebastian van de Linde; Ulrich Terpitz
Journal:  Sci Rep       Date:  2018-01-12       Impact factor: 4.379

  5 in total

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