Literature DB >> 19275262

Solvation dynamics of model peptides probed by terahertz spectroscopy. Observation of the onset of collective network motions.

Benjamin Born1, Hermann Weingärtner, Erik Bründermann, Martina Havenith.   

Abstract

We have studied the solvation of model peptides at low hydration levels by terahertz absorption spectroscopy. We have recorded the concentration-dependent terahertz absorption coefficients of N-acetyl-glycine-amide (NAGA), N-acetyl-glycine-methylamide (NAGMA), N-acetyl-leucine-amide (NALA), N-acetyl-leucine-methylamide (NALMA), and N-acetyl-tryptophan-amide (NATA) in aqueous solution. We find a dramatic decrease in the THz absorption, if the number of water molecules per solute is less than 18-20. This change is taken as a signature for the breakdown of peptide-water network motions, which supports the hypothesis that a minimum number of hydration waters is required to activate these motions. This is well below a monolayer coverage of the model peptides. It is interesting to note that the required hydration level corresponds to the number of water molecules which are required for biological functionality.

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Year:  2009        PMID: 19275262     DOI: 10.1021/ja808997y

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  9 in total

1.  Label-free protein detection using terahertz time-domain spectroscopy.

Authors:  Xiaohui Han; Shihan Yan; Ziyi Zang; Dongshan Wei; Hong-Liang Cui; Chunlei Du
Journal:  Biomed Opt Express       Date:  2018-02-06       Impact factor: 3.732

2.  Do hydration dynamics follow the structural perturbation during thermal denaturation of a protein: a terahertz absorption study.

Authors:  Trung Quan Luong; Pramod Kumar Verma; Rajib Kumar Mitra; Martina Havenith
Journal:  Biophys J       Date:  2011-08-17       Impact factor: 4.033

3.  Amide Spectral Fingerprints are Hydrogen Bonding-Mediated.

Authors:  Sara Gómez; Cettina Bottari; Franco Egidi; Tommaso Giovannini; Barbara Rossi; Chiara Cappelli
Journal:  J Phys Chem Lett       Date:  2022-06-30       Impact factor: 6.888

4.  Hydration Dynamics of Model Peptides with Different Hydrophobic Character.

Authors:  Laura Lupi; Brenda Bracco; Paola Sassi; Silvia Corezzi; Assunta Morresi; Daniele Fioretto; Lucia Comez; Marco Paolantoni
Journal:  Life (Basel)       Date:  2022-04-12

5.  The dynamics of peptide-water interactions in dialanine: An ultrafast amide I 2D IR and computational spectroscopy study.

Authors:  Chi-Jui Feng; Andrei Tokmakoff
Journal:  J Chem Phys       Date:  2017-08-28       Impact factor: 3.488

6.  Density functional theory investigation of cocaine water complexes.

Authors:  Lakshmipathi Senthilkumar; Palanivel Umadevi; Kumaranathapuram Natarajan Sweety Nithya; Ponmalai Kolandaivel
Journal:  J Mol Model       Date:  2013-05-18       Impact factor: 1.810

7.  Evidence of functional protein dynamics from X-ray crystallographic ensembles.

Authors:  Jonathan E Kohn; Pavel V Afonine; Jory Z Ruscio; Paul D Adams; Teresa Head-Gordon
Journal:  PLoS Comput Biol       Date:  2010-08-26       Impact factor: 4.475

8.  Microfluidic Devices for Terahertz Spectroscopy of Live Cells Toward Lab-on-a-Chip Applications.

Authors:  Qi Tang; Min Liang; Yi Lu; Pak Kin Wong; Gerald J Wilmink; Donna Zhang; Hao Xin
Journal:  Sensors (Basel)       Date:  2016-04-04       Impact factor: 3.576

9.  Investigation of Dipolar Response of the Hydrated Hen-Egg White Lysozyme Complex under Externally Applied Electric Fields: Insights from Non-equilibrium Molecular Dynamics.

Authors:  HaoLun Wu; Mohammad Reza Ghaani; Prithwish K Nandi; Niall J English
Journal:  J Phys Chem B       Date:  2022-01-21       Impact factor: 2.991

  9 in total

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