Literature DB >> 19272997

Using the model-based residual bootstrap to quantify uncertainty in fiber orientations from Q-ball analysis.

Hamied A Haroon1, David M Morris, Karl V Embleton, Daniel C Alexander, Geoffrey J M Parker.   

Abstract

Bootstrapping of repeated diffusion-weighted image datasets enables nonparametric quantification of the uncertainty in the inferred fiber orientation. The wild bootstrap and the residual bootstrap are model-based residual resampling methods which use a single dataset. Previously, the wild bootstrap method has been presented as an alternative to conventional bootstrapping for diffusion tensor imaging. Here we present a study of an implementation of model-based residual bootstrapping using q -ball analysis and compare the outputs with conventional bootstrapping. We show that model-based residual bootstrap q-ball generates results that closely match the output of the conventional bootstrap. Both the residual and conventional bootstrap of multifiber methods can be used to estimate the probability of different numbers of fiber populations existing in different brain tissues. Also, we have shown that these methods can be used to provide input for probabilistic tractography, avoiding existing limitations associated with data calibration and model selection.

Mesh:

Year:  2008        PMID: 19272997     DOI: 10.1109/TMI.2008.2006528

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  20 in total

1.  The non-local bootstrap--estimation of uncertainty in diffusion MRI.

Authors:  Pew-Thian Yap; Hongyu An; Yasheng Chen; Dinggang Shen
Journal:  Inf Process Med Imaging       Date:  2013

2.  Investigating the prevalence of complex fiber configurations in white matter tissue with diffusion magnetic resonance imaging.

Authors:  Ben Jeurissen; Alexander Leemans; Jacques-Donald Tournier; Derek K Jones; Jan Sijbers
Journal:  Hum Brain Mapp       Date:  2012-05-19       Impact factor: 5.038

3.  Quality assessment of high angular resolution diffusion imaging data using bootstrap on Q-ball reconstruction.

Authors:  Julien Cohen-Adad; Maxime Descoteaux; Lawrence L Wald
Journal:  J Magn Reson Imaging       Date:  2011-05       Impact factor: 4.813

4.  Probabilistic fiber tracking using the residual bootstrap with constrained spherical deconvolution.

Authors:  Ben Jeurissen; Alexander Leemans; Derek K Jones; Jacques-Donald Tournier; Jan Sijbers
Journal:  Hum Brain Mapp       Date:  2011-03       Impact factor: 5.038

5.  Distortion correction for diffusion-weighted MRI tractography and fMRI in the temporal lobes.

Authors:  Karl V Embleton; Hamied A Haroon; David M Morris; Matthew A Lambon Ralph; Geoff J M Parker
Journal:  Hum Brain Mapp       Date:  2010-10       Impact factor: 5.038

Review 6.  Mapping brain anatomical connectivity using white matter tractography.

Authors:  Mariana Lazar
Journal:  NMR Biomed       Date:  2010-08       Impact factor: 4.044

Review 7.  Diffusion tensor imaging and beyond.

Authors:  Jacques-Donald Tournier; Susumu Mori; Alexander Leemans
Journal:  Magn Reson Med       Date:  2011-04-05       Impact factor: 4.668

8.  Uncertainty assessment of gamma-aminobutyric acid concentration of different brain regions in individual and group using residual bootstrap analysis.

Authors:  Meng Chen; Congyu Liao; Song Chen; Qiuping Ding; Darong Zhu; Hui Liu; Xu Yan; Jianhui Zhong
Journal:  Med Biol Eng Comput       Date:  2016-10-01       Impact factor: 2.602

9.  Uncertainty Visualization in HARDI based on Ensembles of ODFs.

Authors:  Fangxiang Jiao; Jeff M Phillips; Yaniv Gur; Chris R Johnson
Journal:  IEEE Pac Vis Symp       Date:  2012-12-31

10.  Spatial Mapping of Translational Diffusion Coefficients Using Diffusion Tensor Imaging: A Mathematical Description.

Authors:  Anil N Shetty; Sharon Chiang; Mirjana Maletic-Savatic; Gregor Kasprian; Marina Vannucci; Wesley Lee
Journal:  Concepts Magn Reson Part A Bridg Educ Res       Date:  2014-04-15       Impact factor: 0.481

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