Literature DB >> 19268708

On the construction of a ground truth framework for evaluating voxel-based diffusion tensor MRI analysis methods.

Wim Van Hecke1, Jan Sijbers, Steve De Backer, Dirk Poot, Paul M Parizel, Alexander Leemans.   

Abstract

Although many studies are starting to use voxel-based analysis (VBA) methods to compare diffusion tensor images between healthy and diseased subjects, it has been demonstrated that VBA results depend heavily on parameter settings and implementation strategies, such as the applied coregistration technique, smoothing kernel width, statistical analysis, etc. In order to investigate the effect of different parameter settings and implementations on the accuracy and precision of the VBA results quantitatively, ground truth knowledge regarding the underlying microstructural alterations is required. To address the lack of such a gold standard, simulated diffusion tensor data sets are developed, which can model an array of anomalies in the diffusion properties of a predefined location. These data sets can be employed to evaluate the numerous parameters that characterize the pipeline of a VBA algorithm and to compare the accuracy, precision, and reproducibility of different post-processing approaches quantitatively. We are convinced that the use of these simulated data sets can improve the understanding of how different diffusion tensor image post-processing techniques affect the outcome of VBA. In turn, this may possibly lead to a more standardized and reliable evaluation of diffusion tensor data sets of large study groups with a wide range of white matter altering pathologies. The simulated DTI data sets will be made available online (http://www.dti.ua.ac.be).

Mesh:

Year:  2009        PMID: 19268708     DOI: 10.1016/j.neuroimage.2009.02.032

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  22 in total

1.  Diffusion tensor imaging metrics of the corpus callosum in relation to bimanual coordination: effect of task complexity and sensory feedback.

Authors:  Jolien Gooijers; Karen Caeyenberghs; Helene M Sisti; Monique Geurts; Marcus H Heitger; Alexander Leemans; Stephan P Swinnen
Journal:  Hum Brain Mapp       Date:  2011-10-22       Impact factor: 5.038

2.  TwinMARM: two-stage multiscale adaptive regression methods for twin neuroimaging data.

Authors:  Yimei Li; John H Gilmore; Jiaping Wang; Martin Styner; Weili Lin; Hongtu Zhu
Journal:  IEEE Trans Med Imaging       Date:  2012-01-24       Impact factor: 10.048

3.  FRATS: Functional Regression Analysis of DTI Tract Statistics.

Authors:  Hongtu Zhu; Martin Styner; Niansheng Tang; Zhexing Liu; Weili Lin; John H Gilmore
Journal:  IEEE Trans Med Imaging       Date:  2010-03-22       Impact factor: 10.048

4.  Multivariate varying coefficient models for DTI tract statistics.

Authors:  Hongtu Zhu; Martin Styner; Yimei Li; Linglong Kong; Yundi Shi; Weili Lin; Christopher Coe; John H Gilmore
Journal:  Med Image Comput Comput Assist Interv       Date:  2010

Review 5.  Application of advanced neuroimaging modalities in pediatric traumatic brain injury.

Authors:  Stephen Ashwal; Karen A Tong; Nirmalya Ghosh; Brenda Bartnik-Olson; Barbara A Holshouser
Journal:  J Child Neurol       Date:  2014-06-22       Impact factor: 1.987

6.  Variability of fMRI-response patterns at different spatial observation scales.

Authors:  Tonio Ball; Thomas P K Breckel; Isabella Mutschler; Ad Aertsen; Andreas Schulze-Bonhage; Jürgen Hennig; Oliver Speck
Journal:  Hum Brain Mapp       Date:  2011-03-14       Impact factor: 5.038

7.  Head injury or head motion? Assessment and quantification of motion artifacts in diffusion tensor imaging studies.

Authors:  Josef Ling; Flannery Merideth; Arvind Caprihan; Amanda Pena; Terri Teshiba; Andrew R Mayer
Journal:  Hum Brain Mapp       Date:  2011-03-09       Impact factor: 5.038

8.  Comparing isotropic and anisotropic smoothing for voxel-based DTI analyses: A simulation study.

Authors:  Wim Van Hecke; Alexander Leemans; Steve De Backer; Ben Jeurissen; Paul M Parizel; Jan Sijbers
Journal:  Hum Brain Mapp       Date:  2010-01       Impact factor: 5.038

9.  Logical circularity in voxel-based analysis: normalization strategy may induce statistical bias.

Authors:  Nicholas J Tustison; Brian B Avants; Philip A Cook; Junghoon Kim; John Whyte; James C Gee; James R Stone
Journal:  Hum Brain Mapp       Date:  2012-11-14       Impact factor: 5.038

10.  Semiparametric Bayesian local functional models for diffusion tensor tract statistics.

Authors:  Zhaowei Hua; David B Dunson; John H Gilmore; Martin A Styner; Hongtu Zhu
Journal:  Neuroimage       Date:  2012-06-23       Impact factor: 6.556

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