Literature DB >> 19267653

Potential of DNA sequences to identify zoanthids (Cnidaria: Zoantharia).

Frederic Sinniger1, James D Reimer, Jan Pawlowski.   

Abstract

The order Zoantharia is known for its chaotic taxonomy and difficult morphological identification. One method that potentially could help for examining such troublesome taxa is DNA barcoding, which identifies species using standard molecular markers. The mitochondrial cytochrome oxidase subunit I (COI) has been utilized to great success in groups such as birds and insects; however, its applicability in many other groups is controversial. Recently, some studies have suggested that barcoding is not applicable to anthozoans. Here, we examine the use of COI and mitochondrial 16S ribosomal DNA for zoanthid identification. Despite the absence of a clear barcoding gap, our results show that for most of 54 zoanthid samples, both markers could separate samples to the species, or species group, level, particularly when easily accessible ecological or distributional data were included. Additionally, we have used the short V5 region of mt 16S rDNA to identify eight old (13 to 50 years old) museum samples. We discuss advantages and disadvantages of COI and mt 16S rDNA as barcodes for Zoantharia, and recommend that either one or both of these markers be considered for zoanthid identification in the future.

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Year:  2008        PMID: 19267653     DOI: 10.2108/zsj.25.1253

Source DB:  PubMed          Journal:  Zoolog Sci        ISSN: 0289-0003            Impact factor:   0.931


  15 in total

1.  The order Zoantharia Rafinesque, 1815 (Cnidaria, Anthozoa: Hexacorallia): supraspecific classification and nomenclature.

Authors:  Martyn E Y Low; Frederic Sinniger; James Davis Reimer
Journal:  Zookeys       Date:  2016-12-14       Impact factor: 1.546

2.  Conveniently pre-tagged and pre-packaged: extended molecular identification and metagenomics using complete metazoan mitochondrial genomes.

Authors:  Agnes Dettai; Cyril Gallut; Sophie Brouillet; Joel Pothier; Guillaume Lecointre; Régis Debruyne
Journal:  PLoS One       Date:  2012-12-14       Impact factor: 3.240

3.  Palytoxin found in Palythoa sp. zoanthids (Anthozoa, Hexacorallia) sold in the home aquarium trade.

Authors:  Jonathan R Deeds; Sara M Handy; Kevin D White; James D Reimer
Journal:  PLoS One       Date:  2011-04-04       Impact factor: 3.240

4.  Effect of phase shift from corals to Zoantharia on reef fish assemblages.

Authors:  Igor C S Cruz; Miguel Loiola; Tiago Albuquerque; Rodrigo Reis; José de Anchieta C C Nunes; James D Reimer; Masaru Mizuyama; Ruy K P Kikuchi; Joel C Creed
Journal:  PLoS One       Date:  2015-01-28       Impact factor: 3.240

5.  Evolution of anthozoan polyp retraction mechanisms: convergent functional morphology and evolutionary allometry of the marginal musculature in order Zoanthidea (Cnidaria: Anthozoa: Hexacorallia).

Authors:  Timothy D Swain; Jennifer L Schellinger; Anna M Strimaitis; Kim E Reuter
Journal:  BMC Evol Biol       Date:  2015-06-30       Impact factor: 3.260

6.  Shallow-water zoantharians (Cnidaria, Hexacorallia) from the Central Indo-Pacific.

Authors:  James D Reimer; Angelo Poliseno; Bert W Hoeksema
Journal:  Zookeys       Date:  2014-10-07       Impact factor: 1.546

7.  Descriptions of two azooxanthellate Palythoa species (Subclass Hexacorallia, Order Zoantharia) from the Ryukyu Archipelago, southern Japan.

Authors:  Yuka Irei; Frederic Sinniger; James Davis Reimer
Journal:  Zookeys       Date:  2015-01-28       Impact factor: 1.546

8.  Metabolomic profiling reveals deep chemical divergence between two morphotypes of the zoanthid Parazoanthus axinellae.

Authors:  Nadja Cachet; Grégory Genta-Jouve; Julijana Ivanisevic; Pierre Chevaldonné; Frédéric Sinniger; Gérald Culioli; Thierry Pérez; Olivier P Thomas
Journal:  Sci Rep       Date:  2015-02-06       Impact factor: 4.379

9.  Diversity of zoanthids (anthozoa: hexacorallia) on Hawaiian seamounts: description of the Hawaiian gold coral and additional zoanthids.

Authors:  Frederic Sinniger; Oscar V Ocaña; Amy R Baco
Journal:  PLoS One       Date:  2013-01-09       Impact factor: 3.240

10.  Unexpected diversity and a new species of Epizoanthus (Anthozoa, Hexacorallia) attached to eunicid worm tubes from the Pacific Ocean.

Authors:  Hiroki Kise; James Davis Reimer
Journal:  Zookeys       Date:  2016-02-10       Impact factor: 1.546

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