Literature DB >> 19266325

Gene targeting in mouse embryonic stem cells.

Lino Tessarollo1, Mary Ellen Palko, Keiko Akagi, Vincenzo Coppola.   

Abstract

The scientific value of a mouse model with a targeted mutation depends greatly upon how carefully the mutation has been engineered. Until recently, our ability to alter the mouse genome has been limited by both the lack of technologies to conditionally target a locus and by conventional cloning. The "cre/loxP" and "recombineering" technologies have overcome some of these limitations and have greatly enhanced our ability to manipulate the mouse genome in a sophisticated way. However, there are still some practical aspects that need to be considered to successfully target a specific genetic locus. Here, we describe the process to engineer a targeted mutation to generate a mouse model. We include a tutorial using the publicly available informatic tools that can be downloaded for processing the genetic information needed to generate a targeting vector.

Entities:  

Mesh:

Year:  2009        PMID: 19266325      PMCID: PMC7282145          DOI: 10.1007/978-1-59745-471-1_8

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  36 in total

1.  BLAT--the BLAST-like alignment tool.

Authors:  W James Kent
Journal:  Genome Res       Date:  2002-04       Impact factor: 9.043

Review 2.  Recombineering: a powerful new tool for mouse functional genomics.

Authors:  N G Copeland; N A Jenkins; D L Court
Journal:  Nat Rev Genet       Date:  2001-10       Impact factor: 53.242

3.  Reexamination of gene targeting frequency as a function of the extent of homology between the targeting vector and the target locus.

Authors:  C Deng; M R Capecchi
Journal:  Mol Cell Biol       Date:  1992-08       Impact factor: 4.272

4.  The length of homology required for gene targeting in embryonic stem cells.

Authors:  P Hasty; J Rivera-Pérez; A Bradley
Journal:  Mol Cell Biol       Date:  1991-11       Impact factor: 4.272

Review 5.  Inducible gene targeting in mice using the Cre/lox system.

Authors:  B Sauer
Journal:  Methods       Date:  1998-04       Impact factor: 3.608

6.  Genetic variation among 129 substrains and its importance for targeted mutagenesis in mice.

Authors:  E M Simpson; C C Linder; E E Sargent; M T Davisson; L E Mobraaten; J J Sharp
Journal:  Nat Genet       Date:  1997-05       Impact factor: 38.330

7.  Establishment in culture of pluripotential cells from mouse embryos.

Authors:  M J Evans; M H Kaufman
Journal:  Nature       Date:  1981-07-09       Impact factor: 49.962

8.  Detection of targeted GFP-Hox gene fusions during mouse embryogenesis.

Authors:  A R Godwin; H S Stadler; K Nakamura; M R Capecchi
Journal:  Proc Natl Acad Sci U S A       Date:  1998-10-27       Impact factor: 11.205

9.  VISTA: computational tools for comparative genomics.

Authors:  Kelly A Frazer; Lior Pachter; Alexander Poliakov; Edward M Rubin; Inna Dubchak
Journal:  Nucleic Acids Res       Date:  2004-07-01       Impact factor: 16.971

10.  Targeted disruption of the c-src proto-oncogene leads to osteopetrosis in mice.

Authors:  P Soriano; C Montgomery; R Geske; A Bradley
Journal:  Cell       Date:  1991-02-22       Impact factor: 41.582

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  9 in total

1.  Meis1 preserves hematopoietic stem cells in mice by limiting oxidative stress.

Authors:  Zeenath Unnisa; Jason P Clark; Jayeeta Roychoudhury; Elizabeth Thomas; Lino Tessarollo; Neal G Copeland; Nancy A Jenkins; H Leighton Grimes; Ashish R Kumar
Journal:  Blood       Date:  2012-10-22       Impact factor: 22.113

2.  Tamalin is a critical mediator of electroconvulsive shock-induced adult neuroplasticity.

Authors:  Sudhirkumar U Yanpallewar; Colleen A Barrick; Mary Ellen Palko; Gianluca Fulgenzi; Lino Tessarollo
Journal:  J Neurosci       Date:  2012-02-15       Impact factor: 6.167

3.  Far Upstream Element Binding Protein Plays a Crucial Role in Embryonic Development, Hematopoiesis, and Stabilizing Myc Expression Levels.

Authors:  Weixin Zhou; Yang Jo Chung; Edgardo R Parrilla Castellar; Ying Zheng; Hye-Jung Chung; Russell Bandle; Juhong Liu; Lino Tessarollo; Eric Batchelor; Peter D Aplan; David Levens
Journal:  Am J Pathol       Date:  2016-01-14       Impact factor: 4.307

4.  An NF-κB--EphrinA5-Dependent Communication between NG2(+) Interstitial Cells and Myoblasts Promotes Muscle Growth in Neonates.

Authors:  Jin-Mo Gu; David J Wang; Jennifer M Peterson; Jonathan Shintaku; Sandya Liyanarachchi; Vincenzo Coppola; Ashley E Frakes; Brian K Kaspar; Dawn D Cornelison; Denis C Guttridge
Journal:  Dev Cell       Date:  2016-01-14       Impact factor: 12.270

5.  Normal viability of Kai1/Cd82 deficient mice.

Authors:  John I Risinger; Mary Custer; Lionel Feigenbaum; R Mark Simpson; Shelley B Hoover; Joshua D Webster; Gadisetti V R Chandramouli; Lino Tessarollo; J Carl Barrett
Journal:  Mol Carcinog       Date:  2013-02-08       Impact factor: 4.784

6.  Fgf3-Fgf4-cis: A new mouse line for studying Fgf functions during mouse development.

Authors:  Matthew J Anderson; Eileen Southon; Lino Tessarollo; Mark Lewandoski
Journal:  Genesis       Date:  2016-01-14       Impact factor: 2.487

7.  Deletion of SNAP-23 results in pre-implantation embryonic lethality in mice.

Authors:  Young Ho Suh; Aki Yoshimoto-Furusawa; Karis A Weih; Lino Tessarollo; Katherine W Roche; Susan Mackem; Paul A Roche
Journal:  PLoS One       Date:  2011-03-29       Impact factor: 3.240

8.  Fatty acid oxidation is required for embryonic stem cell survival during metabolic stress.

Authors:  Hualong Yan; Navdeep Malik; Young-Im Kim; Yunlong He; Mangmang Li; Wendy Dubois; Huaitian Liu; Tyler J Peat; Joe T Nguyen; Yu-Chou Tseng; Gamze Ayaz; Waseem Alzamzami; King Chan; Thorkell Andresson; Lino Tessarollo; Beverly A Mock; Maxwell P Lee; Jing Huang
Journal:  EMBO Rep       Date:  2021-05-05       Impact factor: 9.071

9.  Detection of differential fetal and adult expression of chloride intracellular channel 4 (CLIC4) protein by analysis of a green fluorescent protein knock-in mouse line.

Authors:  Vc Padmakumar; Katelyn E Masiuk; Dror Luger; Christina Lee; Vincenzo Coppola; Lino Tessarollo; Shelley B Hoover; Irina Karavanova; Andres Buonanno; R Mark Simpson; Stuart H Yuspa
Journal:  BMC Dev Biol       Date:  2014-05-28       Impact factor: 1.978

  9 in total

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