Literature DB >> 19264959

Multiple ERK substrates execute single biological processes in Caenorhabditis elegans germ-line development.

Swathi Arur1, Mitsue Ohmachi, Sudhir Nayak, Matthew Hayes, Alejandro Miranda, Amanda Hay, Andy Golden, Tim Schedl.   

Abstract

RAS-extracellular signal regulated kinase (ERK) signaling governs multiple aspects of cell fate specification, cellular transitions, and growth by regulating downstream substrates through phosphorylation. Understanding how perturbations to the ERK signaling pathway lead to developmental disorders and cancer hinges critically on identification of the substrates. Yet, only a limited number of substrates have been identified that function in vivo to execute ERK-regulated processes. The Caenorhabditis elegans germ line utilizes the well-conserved RAS-ERK signaling pathway in multiple different contexts. Here, we present an integrated functional genomic approach that identified 30 ERK substrates, each of which functions to regulate one or more of seven distinct biological processes during C. elegans germ-line development. Our results provide evidence for three themes that underlie the robustness and specificity of biological outcomes controlled by ERK signaling in C. elegans that are likely relevant to ERK signaling in other organisms: (i) multiple diverse ERK substrates function to control each individual biological process; (ii) different combinations of substrates function to control distinct biological processes; and (iii) regulatory feedback loops between ERK and its substrates help reinforce or attenuate ERK activation. Substrates identified here have conserved orthologs in humans, suggesting that insights from these studies will contribute to our understanding of human diseases involving deregulated ERK activity.

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Year:  2009        PMID: 19264959      PMCID: PMC2660749          DOI: 10.1073/pnas.0812285106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  29 in total

1.  A global profile of germline gene expression in C. elegans.

Authors:  V Reinke; H E Smith; J Nance; J Wang; C Van Doren; R Begley; S J Jones; E B Davis; S Scherer; S Ward; S K Kim
Journal:  Mol Cell       Date:  2000-09       Impact factor: 17.970

Review 2.  MAP kinases.

Authors:  Z Chen; T B Gibson; F Robinson; L Silvestro; G Pearson; B Xu; A Wright; C Vanderbilt; M H Cobb
Journal:  Chem Rev       Date:  2001-08       Impact factor: 60.622

3.  Identification of novel MAP kinase pathway signaling targets by functional proteomics and mass spectrometry.

Authors:  T S Lewis; J B Hunt; L D Aveline; K R Jonscher; D F Louie; J M Yeh; T S Nahreini; K A Resing; N G Ahn
Journal:  Mol Cell       Date:  2000-12       Impact factor: 17.970

Review 4.  The epidermal growth factor system in Caenorhabditis elegans.

Authors:  Nadeem Moghal; Paul W Sternberg
Journal:  Exp Cell Res       Date:  2003-03-10       Impact factor: 3.905

5.  Multiple functions and dynamic activation of MPK-1 extracellular signal-regulated kinase signaling in Caenorhabditis elegans germline development.

Authors:  Min-Ho Lee; Mitsue Ohmachi; Swathi Arur; Sudhir Nayak; Ross Francis; Diane Church; Eric Lambie; Tim Schedl
Journal:  Genetics       Date:  2007-12       Impact factor: 4.562

6.  On the role of RNA amplification in dsRNA-triggered gene silencing.

Authors:  T Sijen; J Fleenor; F Simmer; K L Thijssen; S Parrish; L Timmons; R H Plasterk; A Fire
Journal:  Cell       Date:  2001-11-16       Impact factor: 41.582

7.  Phosphorylation of paxillin via the ERK mitogen-activated protein kinase cascade in EL4 thymoma cells.

Authors:  H Ku; K E Meier
Journal:  J Biol Chem       Date:  2000-04-14       Impact factor: 5.157

8.  DOC1R: a MAP kinase substrate that control microtubule organization of metaphase II mouse oocytes.

Authors:  M Emilie Terret; Christophe Lefebvre; Alexandre Djiane; Pascale Rassinier; Jacques Moreau; Bernard Maro; Marie-Helene Verlhac
Journal:  Development       Date:  2003-08-27       Impact factor: 6.868

9.  Identification of the putative MAP kinase docking site in the thyroid hormone receptor-beta1 DNA-binding domain: functional consequences of mutations at the docking site.

Authors:  Hung-Yun Lin; ShenLi Zhang; Brian L West; Heng-Yuan Tang; Teresa Passaretti; Faith B Davis; Paul J Davis
Journal:  Biochemistry       Date:  2003-06-24       Impact factor: 3.162

10.  Meiotic spindle stability depends on MAPK-interacting and spindle-stabilizing protein (MISS), a new MAPK substrate.

Authors:  Christophe Lefebvre; M Emilie Terret; Alexandre Djiane; Pascale Rassinier; Bernard Maro; Marie-Hélène Verlhac
Journal:  J Cell Biol       Date:  2002-05-13       Impact factor: 10.539

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  74 in total

1.  The deubiquitinating enzyme USP-46 negatively regulates the degradation of glutamate receptors to control their abundance in the ventral nerve cord of Caenorhabditis elegans.

Authors:  Jennifer R Kowalski; Caroline L Dahlberg; Peter Juo
Journal:  J Neurosci       Date:  2011-01-26       Impact factor: 6.167

2.  The two faces of TOE-2.

Authors:  Mark Gurling; Gian Garriga
Journal:  Worm       Date:  2015-02-03

Review 3.  Canonical RTK-Ras-ERK signaling and related alternative pathways.

Authors:  Meera V Sundaram
Journal:  WormBook       Date:  2013-07-11

Review 4.  ERK as a model for systems biology of enzyme kinetics in cells.

Authors:  Alan S Futran; A James Link; Rony Seger; Stanislav Y Shvartsman
Journal:  Curr Biol       Date:  2013-11-04       Impact factor: 10.834

5.  Ras, Ral, and Rap1 in C. elegans.

Authors:  Neal R Rasmussen; David J Reiner
Journal:  Methods Mol Biol       Date:  2021

6.  EOR-2 is an obligate binding partner of the BTB-zinc finger protein EOR-1 in Caenorhabditis elegans.

Authors:  Kelly Howell; Swathi Arur; Tim Schedl; Meera V Sundaram
Journal:  Genetics       Date:  2010-01-11       Impact factor: 4.562

7.  Generation and purification of highly specific antibodies for detecting post-translationally modified proteins in vivo.

Authors:  Swathi Arur; Tim Schedl
Journal:  Nat Protoc       Date:  2014-01-23       Impact factor: 13.491

8.  A signaling-induced switch in dicer localization and function.

Authors:  Fuqu Hu; Eric C Lai; Katsutomo Okamura
Journal:  Dev Cell       Date:  2014-12-08       Impact factor: 12.270

9.  A requirement for ERK-dependent Dicer phosphorylation in coordinating oocyte-to-embryo transition in C. elegans.

Authors:  Melanie Drake; Tokiko Furuta; Kin Man Suen; Gabriel Gonzalez; Bin Liu; Awdhesh Kalia; John E Ladbury; Andrew Z Fire; James B Skeath; Swathi Arur
Journal:  Dev Cell       Date:  2014-12-08       Impact factor: 12.270

10.  Interaction with Shc prevents aberrant Erk activation in the absence of extracellular stimuli.

Authors:  Kin Man Suen; Chi-Chuan Lin; Roger George; Fernando A Melo; Eleanor R Biggs; Zamal Ahmed; Melanie N Drake; Swathi Arur; Stefan T Arold; John E Ladbury
Journal:  Nat Struct Mol Biol       Date:  2013-04-14       Impact factor: 15.369

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