Literature DB >> 19262808

Phylogenetic Relationships Among Selected Heteroderoidea Based on 18S and ITS Ribosomal DNA.

V R Ferris, A Sabo, J G Baldwin, M Mundo-Ocampo, R N Inserra, S Sharma.   

Abstract

In a study of relationships among selected cyst-forming and noncyst-forming species of Heteroderoidea, combined sequences comprised of DNA from part of the conserved 18S ribosomal RNA gene (rDNA) plus the complete ITS rDNA segment were more similar to analyses based on the ITS data alone than to analyses based on the 18S data alone. One of the two noncyst-forming species, Ekphymatodera thomasoni, grouped with cyst-forming species of Heteroderoidea. Bilobodera flexa, also a noncyst-forming species, was separated from all the other taxa by a long branch. Afenestrata koreana, with a weakly sclerotized cyst, grouped closely with H. bifenestra. These observations suggest that phylogenetic analyses using molecular data may aid in our understanding of the evolution of cyst formation in nematodes, including the possibility of secondary loss. The usefulness of molecular phylogenetic analyses in nematodes may depend more on the particular selection of taxa than on mere addition of data from additional genes.

Entities:  

Keywords:  18S gene; 5.8S gene; Afenestrata koreana; Bilobodera flexa; Cactodera betulae; Ekphymatodera thomasoni; Globodera; Heterodera bifenestra; ITS1; ITS2; nematode; phylogenetic analysis; ribosomal DNA

Year:  2004        PMID: 19262808      PMCID: PMC2620772     

Source DB:  PubMed          Journal:  J Nematol        ISSN: 0022-300X            Impact factor:   1.402


  5 in total

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Authors:  C H Bae; A L Szalanski; R T Robbins
Journal:  J Nematol       Date:  2009-03       Impact factor: 1.402

2.  Phylogenetic relationships of the marine nematode family comesomatidae.

Authors:  Jyotsna Sharma; Lu Sun; W Duane Hope; Virginia R Ferris
Journal:  J Nematol       Date:  2006-06       Impact factor: 1.402

3.  New Cyst Nematode, Heterodera sojae n. sp. (Nematoda: Heteroderidae) from Soybean in Korea.

Authors:  Heonil Kang; Geun Eun; Jihye Ha; Yongchul Kim; Namsook Park; Donggeun Kim; Insoo Choi
Journal:  J Nematol       Date:  2016-12       Impact factor: 1.402

4.  Ribosomal and Mitochondrial DNA Analyses of Xiphinema americanum-Group Populations.

Authors:  Stela S Lazarova; Gaynor Malloch; Claudio M G Oliveira; Judith Hübschen; Roy Neilson
Journal:  J Nematol       Date:  2006-12       Impact factor: 1.402

5.  Reliability and Utility of Standard Gene Sequence Barcodes for the Identification and Differentiation of Cyst Nematodes of the Genus Heterodera.

Authors:  Daniel C Huston; Manda Khudhir; Mike Hodda
Journal:  J Nematol       Date:  2022-07-29       Impact factor: 1.481

  5 in total

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