Literature DB >> 19262801

Phylogenetic Relationships Among Xiphinema and Xiphidorus Nematode Species from Brazil Inferred from 18S rDNA Sequences.

Claudio M G Oliveira, Judith Hübschen, Derek J F Brown, Luiz C C B Ferraz, Frank Wright, Roy Neilson.   

Abstract

Maximum likelihood trees produced from 18S rDNA sequences separated 14 Xiphinema and five Xiphidorus nematode species from Brazil into distinct groups that concurred with their current morphological taxonomic status. Species belonging to the X. americanum group (X. brevicolle, X. diffusum, X. oxycaudatum, and X. peruvianum) formed a single group that was clearly separated from the other Xiphinema species. As with previous taxonomic studies that noted only minor morphological differences between putative X. americanum group species, separation of these species based upon 18S rDNA sequences was inconclusive. Thus it is probable that instead of comprising distinct species, the X. americanum group may in fact represent numerous morphotypes with large inter- and intra- population morphological variability that may be environmentally driven. Within the cluster representing non X. americanum group species, there was little statistical support to clearly separate species. However, three subgroups, comprising (i) the X. setariae/vulgare complex, (ii) X. ifacolum and X. paritaliae, and (iii) X. brasiliense and X. ensiculiferum were well resolved.

Entities:  

Keywords:  18S rDNA; Xiphidorus; Xiphinema; longidorid; molecular systematics; plant-parasitic nematode; ribosomal DNA

Year:  2004        PMID: 19262801      PMCID: PMC2620768     

Source DB:  PubMed          Journal:  J Nematol        ISSN: 0022-300X            Impact factor:   1.402


  11 in total

1.  The who, what and where of longidoridae and trichodoridae.

Authors:  Wilfrida Decraemer; R T Robbins
Journal:  J Nematol       Date:  2007-12       Impact factor: 1.402

2.  Xiphinema krugi, Species Complex or Complex of Cryptic Species?

Authors:  Claudio M G Oliveira; Luiz C C B Ferraz; Roy Neilson
Journal:  J Nematol       Date:  2006-12       Impact factor: 1.402

3.  Ribosomal and Mitochondrial DNA Analyses of Xiphinema americanum-Group Populations.

Authors:  Stela S Lazarova; Gaynor Malloch; Claudio M G Oliveira; Judith Hübschen; Roy Neilson
Journal:  J Nematol       Date:  2006-12       Impact factor: 1.402

4.  First report, morphological and molecular characterization of Xiphinemaelongatum and X.pachtaicum (Nematoda, Longidoridae) from Ethiopia.

Authors:  Gezahegne Getaneh; Wim Bert; Wilfrida Decraemer
Journal:  Zookeys       Date:  2015-02-18       Impact factor: 1.546

5.  Genetic diversity, and description of a new dagger nematode, Xiphinema afratakhtehnsis sp. nov., (Dorylaimida: Longidoridae) in natural forests of southeastern Gorgan, northern Iran.

Authors:  Zeinab Mirzaie Fouladvand; Ebrahim Pourjam; Pablo Castillo; Majid Pedram
Journal:  PLoS One       Date:  2019-05-01       Impact factor: 3.240

6.  Profiling nematode communities in unmanaged flowerbed and agricultural field soils in Japan by DNA barcode sequencing.

Authors:  Hisashi Morise; Erika Miyazaki; Shoko Yoshimitsu; Toshihiko Eki
Journal:  PLoS One       Date:  2012-12-20       Impact factor: 3.240

7.  Characterization of the two intra-individual sequence variants in the 18S rRNA gene in the plant parasitic nematode, Rotylenchulus reniformis.

Authors:  Seloame T Nyaku; Venkateswara R Sripathi; Ramesh V Kantety; Yong Q Gu; Kathy Lawrence; Govind C Sharma
Journal:  PLoS One       Date:  2013-04-11       Impact factor: 3.240

8.  Using mitogenomic and nuclear ribosomal sequence data to investigate the phylogeny of the Xiphinema americanum species complex.

Authors:  Inga A Zasada; Amy Peetz; Dana K Howe; Larry J Wilhelm; Daravuth Cheam; Dee R Denver; Ashleigh B Smythe
Journal:  PLoS One       Date:  2014-02-27       Impact factor: 3.240

9.  Morphological and molecular characterisation, and phylogenetic position of X. browni sp. n., X. penevi sp. n. and two known species of Xiphinema americanum-group (Nematoda, Longidoridae).

Authors:  Stela Lazarova; Vlada Peneva; Shesh Kumari
Journal:  Zookeys       Date:  2016-03-28       Impact factor: 1.546

10.  The utility of mtDNA and rDNA for barcoding and phylogeny of plant-parasitic nematodes from Longidoridae (Nematoda, Enoplea).

Authors:  J E Palomares-Rius; C Cantalapiedra-Navarrete; A Archidona-Yuste; S A Subbotin; P Castillo
Journal:  Sci Rep       Date:  2017-09-07       Impact factor: 4.379

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