Literature DB >> 19256615

Exploring hysteresis and energy dissipation in single-molecule force spectroscopy.

Zion Tshiprut1, Michael Urbakh.   

Abstract

We propose an analytical approach to describe the active rebinding and force hysteresis observed in single-molecule pulling experiments. We derive equations for dependences of the measured quantities on the properties of molecular potential, effective stiffness of the pulling spring, and the pulling velocity. The calculations predict that the energy dissipated per an unbinding-rebinding cycle strongly increases with the steepness of the molecular potential and with decreasing the spring stiffness. A comparison of analytical results with Langevin simulations shows that the scaling relations for the barrier heights and most probable forces are more accurate in the case of active rebinding than for unbinding. Our consideration demonstrates that simultaneous analysis of probability density functions for unbinding and rebinding forces improves essentially the accuracy of retrieval information on intrinsic parameters of the molecular complex from the force measurements.

Year:  2009        PMID: 19256615     DOI: 10.1063/1.3077867

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  2 in total

1.  Collapse dynamics of single proteins extended by force.

Authors:  Ronen Berkovich; Sergi Garcia-Manyes; Michael Urbakh; Joseph Klafter; Julio M Fernandez
Journal:  Biophys J       Date:  2010-06-02       Impact factor: 4.033

2.  Kinetics and energetics of biomolecular folding and binding.

Authors:  Christopher A Pierse; Olga K Dudko
Journal:  Biophys J       Date:  2013-11-05       Impact factor: 4.033

  2 in total

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