Literature DB >> 19255485

Cloning, expression, purification and preliminary crystallographic studies of the adenylate/uridylate-rich element-binding protein HuR complexed with its target RNA.

Daisuke Iyaguchi1, Min Yao, Isao Tanaka, Eiko Toyota.   

Abstract

Adenylate/uridylate-rich elements (AREs), which are found in the 3'-untranslated region (UTR) of many mRNAs, influence the stability of cytoplasmic mRNA. HuR (human antigen R) binds to AREs and regulates various genes. In order to reveal the RNA-recognition mechanism of HuR protein, an RNA-binding region of human HuR containing two N-terminal RNA-recognition motif domains bound to an 11-base RNA fragment has been crystallized. The crystals belonged to space group P2(1)2(1)2(1), with unit-cell parameters a = 42.4, b = 44.9, c = 91.1 A. X-ray diffraction data were collected to 1.8 A resolution.

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Year:  2009        PMID: 19255485      PMCID: PMC2650458          DOI: 10.1107/S174430910900400X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  19 in total

1.  HuR-SIRT: the hairy world of posttranscriptional control.

Authors:  Carol J Wilusz; Jeffrey Wilusz
Journal:  Mol Cell       Date:  2007-02-23       Impact factor: 17.970

2.  The RNA-binding protein HuR promotes cell migration and cell invasion by stabilizing the beta-actin mRNA in a U-rich-element-dependent manner.

Authors:  Virginie Dormoy-Raclet; Isabelle Ménard; Eveline Clair; Ghada Kurban; Rachid Mazroui; Sergio Di Marco; Christopher von Roretz; Arnim Pause; Imed-Eddine Gallouzi
Journal:  Mol Cell Biol       Date:  2007-06-04       Impact factor: 4.272

3.  Specific protein domains mediate cooperative assembly of HuR oligomers on AU-rich mRNA-destabilizing sequences.

Authors:  Elizabeth J Fialcowitz-White; Brandy Y Brewer; Jeff D Ballin; Chris D Willis; Eric A Toth; Gerald M Wilson
Journal:  J Biol Chem       Date:  2007-05-21       Impact factor: 5.157

4.  HuR binds to a single site on the C/EBPbeta mRNA of 3T3-L1 adipocytes.

Authors:  Heath Jones; Melinda Carver; Phillip H Pekala
Journal:  Biochem Biophys Res Commun       Date:  2007-02-02       Impact factor: 3.575

5.  Posttranscriptional regulation of IL-13 in T cells: role of the RNA-binding protein HuR.

Authors:  Vincenzo Casolaro; Xi Fang; Brian Tancowny; Jinshui Fan; Fan Wu; Subramanya Srikantan; S Yukiko Asaki; Umberto De Fanis; Shau-Ku Huang; Myriam Gorospe; Ulus X Atasoy; Cristiana Stellato
Journal:  J Allergy Clin Immunol       Date:  2008-02-14       Impact factor: 10.793

6.  Overexpression of HuR, a nuclear-cytoplasmic shuttling protein, increases the in vivo stability of ARE-containing mRNAs.

Authors:  X C Fan; J A Steitz
Journal:  EMBO J       Date:  1998-06-15       Impact factor: 11.598

7.  RNA stabilization by the AU-rich element binding protein, HuR, an ELAV protein.

Authors:  S S Peng; C Y Chen; N Xu; A B Shyu
Journal:  EMBO J       Date:  1998-06-15       Impact factor: 11.598

8.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

Review 9.  AU-rich elements: characterization and importance in mRNA degradation.

Authors:  C Y Chen; A B Shyu
Journal:  Trends Biochem Sci       Date:  1995-11       Impact factor: 13.807

10.  Stabilization of Snail by HuR in the process of hydrogen peroxide induced cell migration.

Authors:  Rui Dong; Jian-Guo Lu; Qing Wang; Xian-Li He; Yan-Kui Chu; Qing-Jiu Ma
Journal:  Biochem Biophys Res Commun       Date:  2007-03-05       Impact factor: 3.575

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  2 in total

1.  Insights from the HuR-interacting transcriptome: ncRNAs, ubiquitin pathways, and patterns of secondary structure dependent RNA interactions.

Authors:  Georges St Laurent; Dmitry Shtokalo; Mohammad Heydarian; Andrey Palyanov; Dmitry Babiy; Jianhua Zhou; Ajit Kumar; Silvio Urcuqui-Inchima
Journal:  Mol Genet Genomics       Date:  2012-10-04       Impact factor: 3.291

2.  Preliminary crystallographic analysis of the RNA-binding domain of HuR and its poly(U)-binding properties.

Authors:  Hong Wang; Heng Li; Hui Shi; Yang Liu; Huihui Liu; Hui Zhao; Liwen Niu; Maikun Teng; Xu Li
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-04-21
  2 in total

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