Literature DB >> 19254541

Dynamic structure factors from lipid membrane molecular dynamics simulations.

Erik G Brandt1, Olle Edholm.   

Abstract

Dynamic structure factors for a lipid bilayer have been calculated from molecular dynamics simulations. From trajectories of a system containing 1024 lipids we obtain wave vectors down to 0.34 nm(-1), which enables us to directly resolve the Rayleigh and Brillouin lines of the spectrum. The results confirm the validity of a model based on generalized hydrodynamics, but also improves the line widths and the position of the Brillouin lines. The improved resolution shows that the Rayleigh line is narrower than in earlier studies, which corresponds to a smaller thermal diffusivity. From a detailed analysis of the power spectrum, we can, in fact, distinguish two dispersive contributions to the elastic scattering. These translate to two exponential relaxation processes in separate time domains. Further, by including a first correction to the wave-vector-dependent position of the Brillouin lines, the results agree favorably to generalized hydrodynamics even up to intermediate wave vectors, and also yields a 20% higher adiabatic sound velocity. The width of the Brillouin lines shows a linear, not quadratic, dependence to low wave vectors.

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Year:  2009        PMID: 19254541      PMCID: PMC2717273          DOI: 10.1016/j.bpj.2008.11.044

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  17 in total

1.  Collective chain dynamics in lipid bilayers by inelastic x-ray scattering.

Authors:  Thomas M Weiss; Poe-Jou Chen; Harald Sinn; Ercan E Alp; Sow-Hsin Chen; Huey W Huang
Journal:  Biophys J       Date:  2003-06       Impact factor: 4.033

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Authors:  J Tabony; B Perly
Journal:  Biochim Biophys Acta       Date:  1991-03-18

3.  Brillouin light scattering measurement of the elastic properties of aligned multilamella lipid samples.

Authors:  J P Lepesant; L Powers; P S Pershan
Journal:  Proc Natl Acad Sci U S A       Date:  1978-04       Impact factor: 11.205

4.  Dispersion relation of lipid membrane shape fluctuations by neutron spin-echo spectrometry.

Authors:  Maikel C Rheinstädter; Wolfgang Häussler; Tim Salditt
Journal:  Phys Rev Lett       Date:  2006-07-28       Impact factor: 9.161

5.  Nanosecond molecular relaxations in lipid bilayers studied by high energy-resolution neutron scattering and in situ diffraction.

Authors:  Maikel C Rheinstädter; Tilo Seydel; Tim Salditt
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2007-01-10

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Authors: 
Journal:  Phys Rev A Gen Phys       Date:  1985-05

7.  Canonical dynamics: Equilibrium phase-space distributions.

Authors: 
Journal:  Phys Rev A Gen Phys       Date:  1985-03

8.  Molecular dynamics simulations of a fluid bilayer of dipalmitoylphosphatidylcholine at full hydration, constant pressure, and constant temperature.

Authors:  O Berger; O Edholm; F Jähnig
Journal:  Biophys J       Date:  1997-05       Impact factor: 4.033

Review 9.  Structure of lipid bilayers.

Authors:  J F Nagle; S Tristram-Nagle
Journal:  Biochim Biophys Acta       Date:  2000-11-10

10.  Mechanical aspects of membrane thermodynamics. Estimation of the mechanical properties of lipid membranes close to the chain melting transition from calorimetry.

Authors:  T Heimburg
Journal:  Biochim Biophys Acta       Date:  1998-12-09
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  1 in total

1.  Headgroup conformations of phospholipids from molecular dynamics simulation: sampling challenges and comparison to experiment.

Authors:  Alexander Vogel; Scott E Feller
Journal:  J Membr Biol       Date:  2011-12-09       Impact factor: 1.843

  1 in total

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