Literature DB >> 19250311

A study of microRNAs in silico and in vivo: bioimaging of microRNA biogenesis and regulation.

Soonhag Kim1, Do W Hwang, Dong S Lee.   

Abstract

Many recent studies have reported that microRNA (miRNA) biogenesis and function are related to the molecular mechanisms of various clinical diseases. Several methods, including northern blotting and DNA chip analyses, are capable of assessing miRNA-production patterns in cells. However, the development of repetitive monitoring of the miRNA-production profile in a noninvasive manner is demanded for the application of miRNAs to human medicine. Here, we describe a noninvasive system for monitoring miRNA biogenesis, from the stage of primary transcripts to that of mature miRNA regulation. We review the optical methods that have been developed to image miRNA production at each step of the miRNA-processing pathway in living subjects. We propose that an optical miRNA-imaging strategy, based on molecular imaging, can be used as an miRNA imaging detector to monitor various miRNAs, by using different reporters, simultaneously, for high-throughput screening, and will provide potential application for the diagnosis and therapeutics of multiple diseases.

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Year:  2009        PMID: 19250311     DOI: 10.1111/j.1742-4658.2009.06935.x

Source DB:  PubMed          Journal:  FEBS J        ISSN: 1742-464X            Impact factor:   5.542


  10 in total

Review 1.  Recent advances in high-performance fluorescent and bioluminescent RNA imaging probes.

Authors:  Yuqiong Xia; Ruili Zhang; Zhongliang Wang; Jie Tian; Xiaoyuan Chen
Journal:  Chem Soc Rev       Date:  2017-05-22       Impact factor: 54.564

Review 2.  A study of microRNAs in silico and in vivo: diagnostic and therapeutic applications in cancer.

Authors:  Scott A Waldman; Andre Terzic
Journal:  FEBS J       Date:  2009-02-25       Impact factor: 5.542

3.  PTEN modulates miR-21 processing via RNA-regulatory protein RNH1.

Authors:  Youn-Jae Kim; Se-Jeong Park; Eun Young Choi; Sol Kim; Hee Jin Kwak; Byong Chul Yoo; Heon Yoo; Seung-Hoon Lee; Daesoo Kim; Jong Bae Park; Jong Heon Kim
Journal:  PLoS One       Date:  2011-12-05       Impact factor: 3.240

4.  Prediction and characterization of microRNAs from eleven fish species by computational methods.

Authors:  Yong Huang; Quan Zou; Hong Tao Ren; Xi Hong Sun
Journal:  Saudi J Biol Sci       Date:  2014-10-23       Impact factor: 4.219

Review 5.  In vivo monitoring of microRNA biogenesis using reporter gene imaging.

Authors:  So Won Oh; Do Won Hwang; Dong Soo Lee
Journal:  Theranostics       Date:  2013-12-08       Impact factor: 11.556

6.  Visualization of microRNA-21 Dynamics in Neuroblastoma Using Magnetic Resonance Imaging Based on a microRNA-21-Responsive Reporter Gene.

Authors:  Guangcheng Bao; Jun Sun; Helin Zheng; Jingxin Hou; Jie Huang; Jie Wei; Yuanqiao Fu; Jiawen Qiu; Xuefeng Zou; Bin Xiang; Jinhua Cai
Journal:  Front Oncol       Date:  2021-11-05       Impact factor: 6.244

Review 7.  Progress of CRISPR-Cas13 Mediated Live-Cell RNA Imaging and Detection of RNA-Protein Interactions.

Authors:  Huake Cao; Yuechen Wang; Ning Zhang; Siyuan Xia; Pengfei Tian; Li Lu; Juan Du; Yinan Du
Journal:  Front Cell Dev Biol       Date:  2022-03-09

8.  Measuring microRNA reporter activity in skeletal muscle using hydrodynamic limb vein injection of plasmid DNA combined with in vivo imaging.

Authors:  Martin G Guess; Kristen Kb Barthel; Emily K Pugach; Leslie A Leinwand
Journal:  Skelet Muscle       Date:  2013-08-01       Impact factor: 4.912

9.  Transgenic Mouse Expressing Optical MicroRNA Reporter for Monitoring MicroRNA-124 Action during Development.

Authors:  Yoori Choi; Do Won Hwang; Mee Young Kim; Joo Yeon Kim; Woong Sun; Dong Soo Lee
Journal:  Front Mol Neurosci       Date:  2016-07-12       Impact factor: 5.639

10.  A cell-based probabilistic approach unveils the concerted action of miRNAs.

Authors:  Shelly Mahlab-Aviv; Nathan Linial; Michal Linial
Journal:  PLoS Comput Biol       Date:  2019-12-02       Impact factor: 4.475

  10 in total

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