Literature DB >> 19245182

Improved and convenient method of RNA isolation from polyphenols and polysaccharide rich plant tissues.

Rekha Kansal1, Kalika Kuhar, Isha Verma, Ram Niwas Gupta, Vijay Kumar Gupta, Kirpa Ram Koundal.   

Abstract

It has been difficult to extract a good quality total RNA from the plant parts (such as seeds) which contain high levels of phenolic compounds, carbohydrates and other compounds that bind and/or co-precipitate with RNA. A simple, rapid and efficient method for isolating total RNA from polyphenols and polysaccharide rich plant tissues has been developed. Seeds of leguminosae family were chosen for the study. The good quality and high yield of total RNA was achieved with A260/A280 ratio of 1.9. Seeds of three different crops (Cajanus cajan, Dolichos biflorus and Vigna mungo) at different developmental stages were evaluated for total RNA extraction using standardized protocol. Seeds at 21 days after flowering (DAF) gave the best results among others (7 DAF and dry seeds). Quality of isolated RNA from all the three crops was further checked by cDNA synthesis. The extracted RNA was found suitable for further molecular applications such as reverse transcription and cDNA library construction.

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Year:  2008        PMID: 19245182

Source DB:  PubMed          Journal:  Indian J Exp Biol        ISSN: 0019-5189            Impact factor:   0.818


  6 in total

1.  Isolation of high-quality RNA from Reaumuria soongorica, a desert plant rich in secondary metabolites.

Authors:  Xiaohua Wang; Honglang Xiao; Guoxiong Chen; Xin Zhao; Chenghong Huang; Cuiyun Chen; Fang Wang
Journal:  Mol Biotechnol       Date:  2011-06       Impact factor: 2.695

2.  Extraction of high quality RNA from polysaccharide matrices using cetyltrimethylammonium bromide.

Authors:  Limin Wang; Jan P Stegemann
Journal:  Biomaterials       Date:  2009-12-03       Impact factor: 12.479

3.  Optimal 3D culture of primary articular chondrocytes for use in the rotating wall vessel bioreactor.

Authors:  Liliana F Mellor; Travis L Baker; Raquel J Brown; Lindsey W Catlin; Julia Thom Oxford
Journal:  Aviat Space Environ Med       Date:  2014-08

4.  A universal method for high-quality RNA extraction from plant tissues rich in starch, proteins and fiber.

Authors:  Amaranatha R Vennapusa; Impa M Somayanda; Colleen J Doherty; S V Krishna Jagadish
Journal:  Sci Rep       Date:  2020-10-09       Impact factor: 4.379

5.  Optimization of quantitative reverse transcription PCR method for analysis of weakly expressed genes in crops based on rapeseed.

Authors:  Michael Moebes; Heike Kuhlmann; Dmitri Demidov; Inna Lermontova
Journal:  Front Plant Sci       Date:  2022-08-09       Impact factor: 6.627

6.  Methods of high integrity RNA extraction from cell/agarose construct.

Authors:  Takahiro Ogura; Akihiro Tsuchiya; Tom Minas; Shuichi Mizuno
Journal:  BMC Res Notes       Date:  2015-11-04
  6 in total

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