Literature DB >> 1924300

Structural determinants of stereospecificity in yeast alcohol dehydrogenase.

E G Weinhold1, A Glasfeld, A D Ellington, S A Benner.   

Abstract

Replacing Leu-182 by Ala in yeast alcohol dehydrogenase (YADH; alcohol:NAD+ oxidoreductase, EC 1.1.1.1) yields a mutant that retains 34% of its kcat value and makes one stereochemical "mistake" every 850,000 turnovers (instead of approximately 1 error every 7,000,000,000 turnovers in native YADH) in its selection of the 4-Re hydrogen of NADH. Half of the decrease in stereochemical fidelity comes from an increase in the rate of transfer of the 4-Si hydrogen of NADH. The mutant also accepts 5-methylnicotinamide adenine dinucleotide, a cofactor analog not accepted by native YADH. The stereospecificity of the mutant is lower still with analogs of NADH where the carboxamide group of the nicotinamide ring is replaced by groups with weaker hydrogen bonding potential. For example, with thio-NADH, the mutant enzyme makes 1 stereochemical "mistake" every 450 turnovers. Finally, the double mutant T157S/L182A, in which Thr-157 is replaced by Ser and Leu-182 is replaced by Ala, also shows decreased stereochemical fidelity. These results suggest that Si transfer in the mutant enzymes arises from NADH bound in a syn conformation in the active site and that this binding is not obstructed in native YADH by side chains essential for catalysis.

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Year:  1991        PMID: 1924300      PMCID: PMC52520          DOI: 10.1073/pnas.88.19.8420

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  18 in total

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Authors:  J LUDOWIEG; A LEVY
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2.  Stereochemistry of enzymic hydrogen transfer to pyridine nucleotides.

Authors:  J W CORNFORTH; G RYBACK
Journal:  Biochem Biophys Res Commun       Date:  1962-11-27       Impact factor: 3.575

3.  The enzymatic transfer of hydrogen. I. The reaction catalyzed by alcohol dehydrogenase.

Authors:  H F FISHER; E E CONN; B VENNESLAND; F H WESTHEIMER
Journal:  J Biol Chem       Date:  1953-06       Impact factor: 5.157

4.  Convergence of active center geometries.

Authors:  R M Garavito; M G Rossmann; P Argos; W Eventoff
Journal:  Biochemistry       Date:  1977-11-15       Impact factor: 3.162

5.  NAD(P)+ analogues: tools for the investigation of the active site of oestradiol 17beta-dehydrogenase from human placenta.

Authors:  J F Biellmann; C G Hirth
Journal:  Eur J Biochem       Date:  1975-08-15

6.  Subunit conformation of yeast alcohol dehydrogenase.

Authors:  H Jörnvall; H Eklund; C I Brändén
Journal:  J Biol Chem       Date:  1978-12-10       Impact factor: 5.157

7.  The stereoselectivity of alcohol dehydrogenases: a stereochemical imperative?

Authors:  S A Benner
Journal:  Experientia       Date:  1982-05-15

8.  Alcohol and polyol dehydrogenases are both divided into two protein types, and structural properties cross-relate the different enzyme activities within each type.

Authors:  H Jörnvall; M Persson; J Jeffery
Journal:  Proc Natl Acad Sci U S A       Date:  1981-07       Impact factor: 11.205

9.  Direct transfer of reduced nicotinamide adenine dinucleotide from glyceraldehyde-3-phosphate dehydrogenase to liver alcohol dehydrogenase.

Authors:  D K Srivastava; S A Bernhard
Journal:  Biochemistry       Date:  1984-09-25       Impact factor: 3.162

10.  The stereospecificities of seven dehydrogenases from Acholeplasma laidlawii. The simplest historical model that explains dehydrogenase stereospecificity.

Authors:  A Glasfeld; G F Leanz; S A Benner
Journal:  J Biol Chem       Date:  1990-07-15       Impact factor: 5.157

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Journal:  Mol Microbiol       Date:  2011-11-20       Impact factor: 3.501

3.  A cold-active and thermostable alcohol dehydrogenase of a psychrotorelant from Antarctic seawater, Flavobacterium frigidimaris KUC-1.

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Journal:  Extremophiles       Date:  2006-10-28       Impact factor: 2.395

4.  Yeast alcohol dehydrogenase structure and catalysis.

Authors:  Savarimuthu Baskar Raj; S Ramaswamy; Bryce V Plapp
Journal:  Biochemistry       Date:  2014-09-03       Impact factor: 3.162

  4 in total

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