Literature DB >> 19233641

Oncogenic gene fusions in epithelial carcinomas.

John R Prensner1, Arul M Chinnaiyan.   

Abstract

New discoveries regarding recurrent chromosomal aberrations in epithelial tumors have challenged the view that gene fusions play a minor role in these cancers. It is now known that recurrent fusions characterize significant subsets of prostate, breast, lung and renal-cell carcinomas, among others. This work has generated new insights into the molecular subtypes of tumors and highlighted important advances in bioinformatics, sequencing, and microarray technology as tools for gene fusion discovery. Given the ubiquity of tyrosine kinases and transcription factors in gene fusions, further interest in the potential 'druggability' of gene fusions with targeted therapeutics has also flourished. Nevertheless, the majority of chromosomal abnormalities in epithelial cancers remain uncharacterized, underscoring the limitations of our knowledge of carcinogenesis and the requirement for further research.

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Year:  2009        PMID: 19233641      PMCID: PMC2676581          DOI: 10.1016/j.gde.2008.11.008

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  67 in total

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Authors:  Sverre Heim; Felix Mitelman
Journal:  Nat Genet       Date:  2008-06       Impact factor: 38.330

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Authors:  Juan-Miguel Mosquera; Sven Perner; Elizabeth M Genega; Martin Sanda; Matthias D Hofer; Kirsten D Mertz; Pamela L Paris; Jeff Simko; Tarek A Bismar; Gustavo Ayala; Rajal B Shah; Massimo Loda; Mark A Rubin
Journal:  Clin Cancer Res       Date:  2008-06-01       Impact factor: 12.531

Review 3.  Molecular mechanisms underlying the MiT translocation subgroup of renal cell carcinomas.

Authors:  K Medendorp; J J M van Groningen; M Schepens; L Vreede; J Thijssen; E F P M Schoenmakers; W H van den Hurk; A Geurts van Kessel; R P Kuiper
Journal:  Cytogenet Genome Res       Date:  2007       Impact factor: 1.636

Review 4.  Thyroid carcinoma: molecular pathways and therapeutic targets.

Authors:  Yuri E Nikiforov
Journal:  Mod Pathol       Date:  2008-05       Impact factor: 7.842

5.  TMPRSS2:ERG fusion identifies a subgroup of prostate cancers with a favorable prognosis.

Authors:  Outi R Saramäki; Anna E Harjula; Paula M Martikainen; Robert L Vessella; Teuvo L J Tammela; Tapio Visakorpi
Journal:  Clin Cancer Res       Date:  2008-06-01       Impact factor: 12.531

6.  EML4-ALK fusion lung cancer: a rare acquired event.

Authors:  Sven Perner; Patrick L Wagner; Francesca Demichelis; Rohit Mehra; Christopher J Lafargue; Benjamin J Moss; Stefanie Arbogast; Alex Soltermann; Walter Weder; Thomas J Giordano; David G Beer; David S Rickman; Arul M Chinnaiyan; Holger Moch; Mark A Rubin
Journal:  Neoplasia       Date:  2008-03       Impact factor: 5.715

7.  Global survey of phosphotyrosine signaling identifies oncogenic kinases in lung cancer.

Authors:  Klarisa Rikova; Ailan Guo; Qingfu Zeng; Anthony Possemato; Jian Yu; Herbert Haack; Julie Nardone; Kimberly Lee; Cynthia Reeves; Yu Li; Yerong Hu; Zhiping Tan; Matthew Stokes; Laura Sullivan; Jeffrey Mitchell; Randy Wetzel; Joan Macneill; Jian Min Ren; Jin Yuan; Corey E Bakalarski; Judit Villen; Jon M Kornhauser; Bradley Smith; Daiqiang Li; Xinmin Zhou; Steven P Gygi; Ting-Lei Gu; Roberto D Polakiewicz; John Rush; Michael J Comb
Journal:  Cell       Date:  2007-12-14       Impact factor: 41.582

8.  Evaluation of paired-end sequencing strategies for detection of genome rearrangements in cancer.

Authors:  Ali Bashir; Stanislav Volik; Colin Collins; Vineet Bafna; Benjamin J Raphael
Journal:  PLoS Comput Biol       Date:  2008-04-25       Impact factor: 4.475

9.  Duplication of the fusion of TMPRSS2 to ERG sequences identifies fatal human prostate cancer.

Authors:  G Attard; J Clark; L Ambroisine; G Fisher; G Kovacs; P Flohr; D Berney; C S Foster; A Fletcher; W L Gerald; H Moller; V Reuter; J S De Bono; P Scardino; J Cuzick; C S Cooper
Journal:  Oncogene       Date:  2007-07-16       Impact factor: 9.867

10.  Estrogen-dependent signaling in a molecularly distinct subclass of aggressive prostate cancer.

Authors:  Sunita R Setlur; Kirsten D Mertz; Yujin Hoshida; Francesca Demichelis; Mathieu Lupien; Sven Perner; Andrea Sboner; Yudi Pawitan; Ove Andrén; Laura A Johnson; Jeff Tang; Hans-Olov Adami; Stefano Calza; Arul M Chinnaiyan; Daniel Rhodes; Scott Tomlins; Katja Fall; Lorelei A Mucci; Philip W Kantoff; Meir J Stampfer; Swen-Olof Andersson; Eberhard Varenhorst; Jan-Erik Johansson; Myles Brown; Todd R Golub; Mark A Rubin
Journal:  J Natl Cancer Inst       Date:  2008-05-27       Impact factor: 13.506

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  29 in total

1.  Integrative analysis of the melanoma transcriptome.

Authors:  Michael F Berger; Joshua Z Levin; Krishna Vijayendran; Andrey Sivachenko; Xian Adiconis; Jared Maguire; Laura A Johnson; James Robinson; Roel G Verhaak; Carrie Sougnez; Robert C Onofrio; Liuda Ziaugra; Kristian Cibulskis; Elisabeth Laine; Jordi Barretina; Wendy Winckler; David E Fisher; Gad Getz; Matthew Meyerson; David B Jaffe; Stacey B Gabriel; Eric S Lander; Reinhard Dummer; Andreas Gnirke; Chad Nusbaum; Levi A Garraway
Journal:  Genome Res       Date:  2010-02-23       Impact factor: 9.043

2.  Discovery of non-ETS gene fusions in human prostate cancer using next-generation RNA sequencing.

Authors:  Dorothee Pflueger; Stéphane Terry; Andrea Sboner; Lukas Habegger; Raquel Esgueva; Pei-Chun Lin; Maria A Svensson; Naoki Kitabayashi; Benjamin J Moss; Theresa Y MacDonald; Xuhong Cao; Terrence Barrette; Ashutosh K Tewari; Mark S Chee; Arul M Chinnaiyan; David S Rickman; Francesca Demichelis; Mark B Gerstein; Mark A Rubin
Journal:  Genome Res       Date:  2010-10-29       Impact factor: 9.043

3.  Recent Advances in Metabolic Profiling And Imaging of Prostate Cancer.

Authors:  Roopa Thapar; Mark A Titus
Journal:  Curr Metabolomics       Date:  2014-04

4.  Ultradense array CGH and discovery of micro-copy number alterations and gene fusions in the cancer genome.

Authors:  Ewa Przybytkowski; Adriana Aguilar-Mahecha; Sheida Nabavi; Peter J Tonellato; Mark Basik
Journal:  Methods Mol Biol       Date:  2013

Review 5.  Prostate cancer research in China.

Authors:  Shan-Cheng Ren; Rui Chen; Ying-Hao Sun
Journal:  Asian J Androl       Date:  2013-04-22       Impact factor: 3.285

Review 6.  FGFR-TACC gene fusions in human glioma.

Authors:  Anna Lasorella; Marc Sanson; Antonio Iavarone
Journal:  Neuro Oncol       Date:  2017-04-01       Impact factor: 12.300

7.  Identification of an inhibitor of the EWS-FLI1 oncogenic transcription factor by high-throughput screening.

Authors:  Patrick J Grohar; Girma M Woldemichael; Laurie B Griffin; Arnulfo Mendoza; Qing-Rong Chen; Choh Yeung; Duane G Currier; Sean Davis; Chand Khanna; Javed Khan; James B McMahon; Lee J Helman
Journal:  J Natl Cancer Inst       Date:  2011-06-08       Impact factor: 13.506

8.  Multiple functions of a glioblastoma fusion oncogene.

Authors:  Ivan Babic; Paul S Mischel
Journal:  J Clin Invest       Date:  2013-01-09       Impact factor: 14.808

Review 9.  Systematic, evidence-based discovery of biomarkers at the NCI.

Authors:  John R Prensner; Arul M Chinnaiyan; Sudhir Srivastava
Journal:  Clin Exp Metastasis       Date:  2012-08-07       Impact factor: 5.150

Review 10.  Our changing view of the genomic landscape of cancer.

Authors:  Daphne W Bell
Journal:  J Pathol       Date:  2010-01       Impact factor: 7.996

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