Literature DB >> 19233178

Insight into "insoluble proteins" with pure water.

Jianxing Song1.   

Abstract

Many proteins are not refoldable and also insoluble. Previously no general method was available to solubilize them and consequently their structural properties remained unknown. Surprisingly, we recently discovered that all insoluble proteins in our laboratory, which are highly diverse, can be solubilized in pure water. Structural characterization by CD and NMR led to their classification into three groups, all of which appear trapped in the highly disordered or partially-folded states with a substantial exposure of hydrophobic side chains. In this review, I discuss our results in a wide context and subsequently propose a model to rationalize the discovery. The potential applications are also explored in studying protein folding, design and membrane proteins.

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Year:  2009        PMID: 19233178     DOI: 10.1016/j.febslet.2009.02.022

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  16 in total

Review 1.  Environment-transformable sequence-structure relationship: a general mechanism for proteotoxicity.

Authors:  Jianxing Song
Journal:  Biophys Rev       Date:  2017-12-04

2.  TDP-43 N terminus encodes a novel ubiquitin-like fold and its unfolded form in equilibrium that can be shifted by binding to ssDNA.

Authors:  Haina Qin; Liang-Zhong Lim; Yuanyuan Wei; Jianxing Song
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-12       Impact factor: 11.205

Review 3.  Protein Design: From the Aspect of Water Solubility and Stability.

Authors:  Rui Qing; Shilei Hao; Eva Smorodina; David Jin; Arthur Zalevsky; Shuguang Zhang
Journal:  Chem Rev       Date:  2022-08-03       Impact factor: 72.087

4.  Structural, stability, dynamic and binding properties of the ALS-causing T46I mutant of the hVAPB MSP domain as revealed by NMR and MD simulations.

Authors:  Shixiong Lua; Haina Qin; Liangzhong Lim; Jiahai Shi; Garvita Gupta; Jianxing Song
Journal:  PLoS One       Date:  2011-11-01       Impact factor: 3.240

5.  Intrinsically unstructured domain 3 of hepatitis C Virus NS5A forms a "fuzzy complex" with VAPB-MSP domain which carries ALS-causing mutations.

Authors:  Garvita Gupta; Haina Qin; Jianxing Song
Journal:  PLoS One       Date:  2012-06-13       Impact factor: 3.240

Review 6.  Adenosine triphosphate energy-independently controls protein homeostasis with unique structure and diverse mechanisms.

Authors:  Jianxing Song
Journal:  Protein Sci       Date:  2021-04-13       Impact factor: 6.993

7.  Insights into protein aggregation by NMR characterization of insoluble SH3 mutants solubilized in salt-free water.

Authors:  Jingxian Liu; Jianxing Song
Journal:  PLoS One       Date:  2009-11-23       Impact factor: 3.240

8.  Shape-Preserved Transformation of Biological Cells into Synthetic Hydrogel Microparticles.

Authors:  Kristin C Meyer; Nicholas R Labriola; Eric M Darling; Bryan Kaehr
Journal:  Adv Biosyst       Date:  2019-01-21

9.  NMR and MD Studies Reveal That the Isolated Dengue NS3 Protease Is an Intrinsically Disordered Chymotrypsin Fold Which Absolutely Requests NS2B for Correct Folding and Functional Dynamics.

Authors:  Garvita Gupta; Liangzhong Lim; Jianxing Song
Journal:  PLoS One       Date:  2015-08-10       Impact factor: 3.240

Review 10.  Why do proteins aggregate? "Intrinsically insoluble proteins" and "dark mediators" revealed by studies on "insoluble proteins" solubilized in pure water.

Authors:  Jianxing Song
Journal:  F1000Res       Date:  2013-03-22
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