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Literature DB >> 19232072

Annotations for all by all - the BioSapiens network.

Abstract

The BioSapiens network has developed a distributed infrastructure for genome and proteome annotation by laboratories anywhere in the world.

Entities: CellLine Disease Gene Species

Mesh：

Substances：
Proteome

Year: 2009 PMID： 19232072 PMCID： PMC2688284 DOI： 10.1186/gb-2009-10-2-401

Source DB: PubMed Journal: Genome Biol ISSN： 1474-7596 Impact factor: 13.583

8 in total

1. Dasty2, an Ajax protein DAS client.

Authors: Rafael C Jimenez; Antony F Quinn; Alexander Garcia; Alberto Labarga; Kieran O'Neill; Fernando Martinez; Gustavo A Salazar; Henning Hermjakob
Journal: Bioinformatics Date: 2008-08-11 Impact factor: 6.937

2. The Protein Feature Ontology: a tool for the unification of protein feature annotations.

Authors: Gabrielle A Reeves; Karen Eilbeck; Michele Magrane; Claire O'Donovan; Luisa Montecchi-Palazzi; Midori A Harris; Sandra Orchard; Rafael C Jimenez; Andreas Prlic; Tim J P Hubbard; Henning Hermjakob; Janet M Thornton
Journal: Bioinformatics Date: 2008-10-20 Impact factor: 6.937

3. The distributed annotation system.

Authors: R D Dowell; R M Jokerst; A Day; S R Eddy; L Stein
Journal: BMC Bioinformatics Date: 2001-10-10 Impact factor: 3.169

4. Integrating biological data--the Distributed Annotation System.

Authors: Andrew M Jenkinson; Mario Albrecht; Ewan Birney; Hagen Blankenburg; Thomas Down; Robert D Finn; Henning Hermjakob; Tim J P Hubbard; Rafael C Jimenez; Philip Jones; Andreas Kähäri; Eugene Kulesha; José R Macías; Gabrielle A Reeves; Andreas Prlić
Journal: BMC Bioinformatics Date: 2008-07-22 Impact factor: 3.169

5. Sequence-based feature prediction and annotation of proteins.

Authors: Agnieszka S Juncker; Lars J Jensen; Andrea Pierleoni; Andreas Bernsel; Michael L Tress; Peer Bork; Gunnar von Heijne; Alfonso Valencia; Christos A Ouzounis; Rita Casadio; Søren Brunak
Journal: Genome Biol Date: 2009-02-02 Impact factor: 13.583

Review 6. Protein function annotation by homology-based inference.

Authors: Yaniv Loewenstein; Domenico Raimondo; Oliver C Redfern; James Watson; Dmitrij Frishman; Michal Linial; Christine Orengo; Janet Thornton; Anna Tramontano
Journal: Genome Biol Date: 2009-02-02 Impact factor: 13.583

Review 7. Integrating sequence, evolution and functional genomics in regulatory genomics.

Authors: Martin Vingron; Alvis Brazma; Richard Coulson; Jacques van Helden; Thomas Manke; Kimmo Palin; Olivier Sand; Esko Ukkonen
Journal: Genome Biol Date: 2009-01-30 Impact factor: 13.583

Review 8. Identifying protein-coding genes in genomic sequences.

Authors: Jennifer Harrow; Alinda Nagy; Alexandre Reymond; Tyler Alioto; Laszlo Patthy; Stylianos E Antonarakis; Roderic Guigó
Journal: Genome Biol Date: 2009-01-30 Impact factor: 13.583

8 in total

4 in total

Annotations for all by all - the BioSapiens network.

1. Dasty2, an Ajax protein DAS client.

2. The Protein Feature Ontology: a tool for the unification of protein feature annotations.

3. The distributed annotation system.

4. Integrating biological data--the Distributed Annotation System.

5. Sequence-based feature prediction and annotation of proteins.

Review 6. Protein function annotation by homology-based inference.

Review 7. Integrating sequence, evolution and functional genomics in regulatory genomics.

Review 8. Identifying protein-coding genes in genomic sequences.

1. GPCRDB: information system for G protein-coupled receptors.

2. Persistence and availability of Web services in computational biology.

3. DASMIweb: online integration, analysis and assessment of distributed protein interaction data.

4. Community annotation in biology.