Literature DB >> 19229900

Relationship between the molecular structure of cyanine dyes and the vibrational fine structure of their electronic absorption spectra.

Heinz Mustroph1, Knut Reiner, Jürgen Mistol, Steffen Ernst, Dietmar Keil, Lothar Hennig.   

Abstract

Electronic absorption spectra of symmetrical cyanine dyes show vibronic sub-bands, attributed to the symmetric C-C valence vibration of the polymethine chain in the electronic excited state. Displacements in the equilibrium configuration between electronic ground and excited states of cyanine dyes lead to longer C-C bonds in the excited state. Additionally, in the electronic ground state, a small degree of bond localisation always remains in the chain depending on the different heterocyclic terminal groups. Our investigations suggest that we can use (3)J(H,H) coupling constants in the polymethine chain to characterise the bond localisation within the chain. Based on these values and the Franck-Condon principle, the intensity distribution among the vibrational sub-bands can be explained.

Entities:  

Year:  2009        PMID: 19229900     DOI: 10.1002/cphc.200800755

Source DB:  PubMed          Journal:  Chemphyschem        ISSN: 1439-4235            Impact factor:   3.102


  9 in total

1.  Two-dimensional spectroscopy of a molecular dimer unveils the effects of vibronic coupling on exciton coherences.

Authors:  Alexei Halpin; Philip J M Johnson; Roel Tempelaar; R Scott Murphy; Jasper Knoester; Thomas L C Jansen; R J Dwayne Miller
Journal:  Nat Chem       Date:  2014-01-12       Impact factor: 24.427

2.  Unified Model for Photophysical and Electro-Optical Properties of Green Fluorescent Proteins.

Authors:  Chi-Yun Lin; Matthew G Romei; Luke M Oltrogge; Irimpan I Mathews; Steven G Boxer
Journal:  J Am Chem Soc       Date:  2019-09-11       Impact factor: 15.419

3.  Modeling the Electronic Absorption Spectra of the Indocarbocyanine Cy3.

Authors:  Mohammed I Sorour; Andrew H Marcus; Spiridoula Matsika
Journal:  Molecules       Date:  2022-06-24       Impact factor: 4.927

4.  Tunable Electronic Structure via DNA-Templated Heteroaggregates of Two Distinct Cyanine Dyes.

Authors:  Jonathan S Huff; Sebastián A Díaz; Matthew S Barclay; Azhad U Chowdhury; Matthew Chiriboga; Gregory A Ellis; Divita Mathur; Lance K Patten; Simon K Roy; Aaron Sup; Austin Biaggne; Brian S Rolczynski; Paul D Cunningham; Lan Li; Jeunghoon Lee; Paul H Davis; Bernard Yurke; William B Knowlton; Igor L Medintz; Daniel B Turner; Joseph S Melinger; Ryan D Pensack
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2022-09-28       Impact factor: 4.177

5.  Fine Structure in Electronic Spectra of Cyanine Dyes: Are Sub-Bands Largely Determined by a Dominant Vibration or a Collection of Singly Excited Vibrations?

Authors:  Heinz Mustroph; Andrew Towns
Journal:  Chemphyschem       Date:  2018-02-23       Impact factor: 3.102

6.  Stereochemistry-Controlled Supramolecular Architectures of New Tetrahydroxy-Functionalised Amphiphilic Carbocyanine Dyes.

Authors:  Boris Schade; Abhishek Kumar Singh; Virginia Wycisk; Jose Luis Cuellar-Camacho; Hans von Berlepsch; Rainer Haag; Christoph Böttcher
Journal:  Chemistry       Date:  2020-04-30       Impact factor: 5.236

7.  Photochemistry with Cyanines in the Near Infrared: A Step to Chemistry 4.0 Technologies.

Authors:  Bernd Strehmel; Christian Schmitz; Kevin Cremanns; Jost Göttert
Journal:  Chemistry       Date:  2019-08-21       Impact factor: 5.236

Review 8.  Far-Red Absorbing Rhodopsins, Insights From Heterodimeric Rhodopsin-Cyclases.

Authors:  Matthias Broser
Journal:  Front Mol Biosci       Date:  2022-01-21

9.  Rational Selection of Cyanines to Generate Conjugate Acid and Free Radicals for Photopolymerization upon Exposure at 860 nm.

Authors:  Qunying Wang; Sergey Popov; Alfred Feilen; Veronika Strehmel; Bernd Strehmel
Journal:  Angew Chem Int Ed Engl       Date:  2021-10-19       Impact factor: 16.823

  9 in total

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