Literature DB >> 19228805

INTEGRALL: a database and search engine for integrons, integrases and gene cassettes.

Alexandra Moura1, Mário Soares, Carolina Pereira, Nuno Leitão, Isabel Henriques, António Correia.   

Abstract

INTEGRALL is a freely available, text-based search system developed with the aim of collecting and organizing information on integrons in a single database. The current release (1.2) contains more than 4800 integron sequences and provides a public genetic repository for sequence data and nomenclature, offering scientists an easy and interactive access to integron's DNA sequences, their molecular arrangements as well as their genetic contexts.

Entities:  

Mesh：

Substances：

Year:  2009        PMID： 19228805     DOI： 10.1093/bioinformatics/btp105

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  166 in total

1.  The influence of the accessory genome on bacterial pathogen evolution.

Authors:  Robert W Jackson; Boris Vinatzer; Dawn L Arnold; Steve Dorus; Jesús Murillo
Journal:  Mob Genet Elements       Date:  2011-05

2.  Evolution of an incompatibility group IncA/C plasmid harboring blaCMY-16 and qnrA6 genes and its transfer through three clones of Providencia stuartii during a two-year outbreak in a Tunisian burn unit.

Authors:  C Arpin; L Thabet; H Yassine; A A Messadi; J Boukadida; V Dubois; L Coulange-Mayonnove; C Andre; C Quentin
Journal:  Antimicrob Agents Chemother       Date:  2011-12-12       Impact factor: 5.191

3.  Detection and characterization of VIM-31, a new variant of VIM-2 with Tyr224His and His252Arg mutations, in a clinical isolate of Enterobacter cloacae.

Authors:  Pierre Bogaerts; Carine Bebrone; Te-Din Huang; Warda Bouchahrouf; Yves Degheldre; Ariane Deplano; Kurt Hoffmann; Youri Glupczynski
Journal:  Antimicrob Agents Chemother       Date:  2012-03-05       Impact factor: 5.191

4.  Diversification of broad host range plasmids correlates with the presence of antibiotic resistance genes.

Authors:  Xiaobin Li; Yafei Wang; Celeste J Brown; Fei Yao; Yong Jiang; Eva M Top; Hui Li
Journal:  FEMS Microbiol Ecol       Date:  2015-12-02       Impact factor: 4.194

Review 5.  Consolidating and Exploring Antibiotic Resistance Gene Data Resources.

Authors:  Basil Britto Xavier; Anupam J Das; Guy Cochrane; Sandra De Ganck; Samir Kumar-Singh; Frank Møller Aarestrup; Herman Goossens; Surbhi Malhotra-Kumar
Journal:  J Clin Microbiol       Date:  2016-01-27       Impact factor: 5.948

6.  Comparison of Class 2 Integron Integrase Activities.

Authors:  Xiaotong Wang; Nana Kong; Mei Cao; Long Zhang; Muzhen Sun; Linlin Xiao; Gang Li; Quhao Wei
Journal:  Curr Microbiol       Date:  2021-02-04       Impact factor: 2.188

7.  Worldwide prevalence of class 2 integrases outside the clinical setting is associated with human impact.

Authors:  Carlos M Rodríguez-Minguela; Juha H A Apajalahti; Benli Chai; James R Cole; James M Tiedje
Journal:  Appl Environ Microbiol       Date:  2009-06-05       Impact factor: 4.792

8.  pIMP-PH114 carrying bla IMP-4 in a Klebsiella pneumoniae strain is closely related to other multidrug-resistant IncA/C2 plasmids.

Authors:  Pak-Leung Ho; Wai-U Lo; Jane Chan; Yuk-Yam Cheung; Kin-Hung Chow; Wing-Cheong Yam; Chi-Ho Lin; Tak-Lun Que
Journal:  Curr Microbiol       Date:  2014-02       Impact factor: 2.188

9.  Structural heterogeneity of attC integron recombination sites revealed by optical tweezers.

Authors:  Ann Mukhortava; Matthias Pöge; Maj Svea Grieb; Aleksandra Nivina; Celine Loot; Didier Mazel; Michael Schlierf
Journal:  Nucleic Acids Res       Date:  2019-02-28       Impact factor: 16.971

10.  ACLAME: a CLAssification of Mobile genetic Elements, update 2010.

Authors:  Raphaël Leplae; Gipsi Lima-Mendez; Ariane Toussaint
Journal:  Nucleic Acids Res       Date:  2009-11-23       Impact factor: 16.971
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.