Literature DB >> 19227361

What ice can teach us about water interactions: a critical comparison of the performance of different water models.

C Vega1, J L F Abascal, M M Conde, J L Aragones.   

Abstract

The performance of several popular water models (TIP3P, TIP4P, TIP5P and TIP4P/2005) is analyzed. For that purpose the predictions for ten different properties of water are investigated, namely: 1. vapour-liquid equilibria (VLE) and critical temperature; 2. surface tension; 3. densities of the different solid structures of water (ices); 4. phase diagram; 5. melting-point properties; 6. maximum in the density of water at room pressure and thermal coefficients alpha and KT; 7. structure of liquid water and ice; 8. equation of state at high pressures; 9. self-diffusion coefficient; 10. dielectric constant. For each property, the performance of each model is analyzed in detail with a critical discussion of the possible reason of the success or failure of the model. A final judgement on the quality of these models is provided. TIP4P/2005 provides the best description of almost all properties of the list, the only exception being the dielectric constant. In second position, TIP5P and TIP4P yield a similar performance overall, and the last place with the poorest description of the water properties is provided by TIP3P. The ideas leading to the proposal and design of the TIP4P/2005 are also discussed in detail. TIP4P/2005 is probably close to the best description of water that can be achieved with a non-polarizable model described by a single Lennard-Jones (LJ) site and three charges.

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Year:  2009        PMID: 19227361     DOI: 10.1039/b805531a

Source DB:  PubMed          Journal:  Faraday Discuss        ISSN: 1359-6640            Impact factor:   4.008


  28 in total

1.  A Kirkwood-Buff force field for the aromatic amino acids.

Authors:  Elizabeth A Ploetz; Paul E Smith
Journal:  Phys Chem Chem Phys       Date:  2011-09-19       Impact factor: 3.676

2.  Temperature and pressure dependence of the optimized soft-sticky dipole-quadrupole-octupole water model.

Authors:  Jerez A Te; Toshiko Ichiye
Journal:  J Chem Phys       Date:  2010-03-21       Impact factor: 3.488

3.  Properties of water along the liquid-vapor coexistence curve via molecular dynamics simulations using the polarizable TIP4P-QDP-LJ water model.

Authors:  Brad A Bauer; Sandeep Patel
Journal:  J Chem Phys       Date:  2009-08-28       Impact factor: 3.488

Review 4.  Molecular Dynamics Simulations of Membrane Permeability.

Authors:  Richard M Venable; Andreas Krämer; Richard W Pastor
Journal:  Chem Rev       Date:  2019-02-12       Impact factor: 60.622

5.  Ab initio thermodynamics of liquid and solid water.

Authors:  Bingqing Cheng; Edgar A Engel; Jörg Behler; Christoph Dellago; Michele Ceriotti
Journal:  Proc Natl Acad Sci U S A       Date:  2019-01-04       Impact factor: 11.205

6.  Six-site polarizable model of water based on the classical Drude oscillator.

Authors:  Wenbo Yu; Pedro E M Lopes; Benoît Roux; Alexander D MacKerell
Journal:  J Chem Phys       Date:  2013-01-21       Impact factor: 3.488

7.  Anomalies in bulk supercooled water at negative pressure.

Authors:  Gaël Pallares; Mouna El Mekki Azouzi; Miguel A González; Juan L Aragones; José L F Abascal; Chantal Valeriani; Frédéric Caupin
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-19       Impact factor: 11.205

8.  Structural Characterization of λ-Repressor Folding from All-Atom Molecular Dynamics Simulations.

Authors:  Yanxin Liu; Johan Strümpfer; Peter L Freddolino; Martin Gruebele; Klaus Schulten
Journal:  J Phys Chem Lett       Date:  2012-04-11       Impact factor: 6.475

9.  Hierarchy of anomalies in the two-dimensional Mercedes-Benz model of water.

Authors:  Tomaz Urbic; Ken A Dill
Journal:  Phys Rev E       Date:  2018-09-11       Impact factor: 2.529

10.  Protein-Ligand Electrostatic Binding Free Energies from Explicit and Implicit Solvation.

Authors:  Saeed Izadi; Boris Aguilar; Alexey V Onufriev
Journal:  J Chem Theory Comput       Date:  2015-08-21       Impact factor: 6.006

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