Literature DB >> 19225662

The role of quaternary structure in (beta/alpha)(8)-barrel proteins: evolutionary happenstance or a higher level of structure-function relationships?

Sean R A Devenish1, Juliet A Gerrard.   

Abstract

Despite significant effort, the role played by quaternary structure in enzymes often remains poorly understood. The (beta/alpha)(8)-barrel fold is a versatile scaffold that has been employed in a wide variety of organisms to catalyse a broad spectrum of reactions, and thus is a convenient motif for further investigation into the importance and role of quaternary structure. This review will highlight studies in which the interplay between catalytic activity and quaternary structure in the (beta/alpha)(8)-barrel family have been explored, revealing examples in which homo-oligomeric structure completes the active site or apparently enhances thermal stability. More recently, results have pointed to the importance of quaternary structure in tuning dynamic motion to optimise catalytic activity.

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Year:  2009        PMID: 19225662     DOI: 10.1039/b818251p

Source DB:  PubMed          Journal:  Org Biomol Chem        ISSN: 1477-0520            Impact factor:   3.876


  7 in total

Review 1.  The interface of protein structure, protein biophysics, and molecular evolution.

Authors:  David A Liberles; Sarah A Teichmann; Ivet Bahar; Ugo Bastolla; Jesse Bloom; Erich Bornberg-Bauer; Lucy J Colwell; A P Jason de Koning; Nikolay V Dokholyan; Julian Echave; Arne Elofsson; Dietlind L Gerloff; Richard A Goldstein; Johan A Grahnen; Mark T Holder; Clemens Lakner; Nicholas Lartillot; Simon C Lovell; Gavin Naylor; Tina Perica; David D Pollock; Tal Pupko; Lynne Regan; Andrew Roger; Nimrod Rubinstein; Eugene Shakhnovich; Kimmen Sjölander; Shamil Sunyaev; Ashley I Teufel; Jeffrey L Thorne; Joseph W Thornton; Daniel M Weinreich; Simon Whelan
Journal:  Protein Sci       Date:  2012-04-23       Impact factor: 6.725

Review 2.  Caught in self-interaction: evolutionary and functional mechanisms of protein homooligomerization.

Authors:  Kosuke Hashimoto; Hafumi Nishi; Stephen Bryant; Anna R Panchenko
Journal:  Phys Biol       Date:  2011-05-13       Impact factor: 2.583

Review 3.  Evolutionary, physicochemical, and functional mechanisms of protein homooligomerization.

Authors:  Hafumi Nishi; Kosuke Hashimoto; Thomas Madej; Anna R Panchenko
Journal:  Prog Mol Biol Transl Sci       Date:  2013       Impact factor: 3.622

4.  Structural and dynamic requirements for optimal activity of the essential bacterial enzyme dihydrodipicolinate synthase.

Authors:  C F Reboul; B T Porebski; M D W Griffin; R C J Dobson; M A Perugini; J A Gerrard; A M Buckle
Journal:  PLoS Comput Biol       Date:  2012-06-07       Impact factor: 4.475

5.  Quaternary structure is an essential component that contributes to the sophisticated allosteric regulation mechanism in a key enzyme from Mycobacterium tuberculosis.

Authors:  Wanting Jiao; Nicola J Blackmore; Ali Reza Nazmi; Emily J Parker
Journal:  PLoS One       Date:  2017-06-30       Impact factor: 3.240

6.  Structural Phylogenetics with Confidence.

Authors:  Ashar J Malik; Anthony M Poole; Jane R Allison
Journal:  Mol Biol Evol       Date:  2020-09-01       Impact factor: 16.240

7.  Contribution of the Oligomeric State to the Thermostability of Isoenzyme 3 from Candida rugosa.

Authors:  María-Efigenia Álvarez-Cao; Roberto González; María A Pernas; María Luisa Rúa
Journal:  Microorganisms       Date:  2018-10-19
  7 in total

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