Literature DB >> 19221049

The "fourth dimension" of gene transcription.

Bert W O'Malley1.   

Abstract

The three dimensions of space provide our relationship to position on the earth, but the fourth dimension of time has an equally profound influence on our lives. Everything from light and sound to weather and biology operate on the principle of measurable temporal periodicity. Consequently, a wide variety of time clocks affect all aspects of our existence. The annual (and biannual) cycles of activity, metabolism, and mating, the monthly physiological clocks of women and men, and the 24-h diurnal rhythms of humans are prime examples. Should it be surprising to us that the fourth dimension also impinges upon gene expression and that the genome itself is regulated by the fastest running of all biological clocks? Recent evidence substantiates the existence of such a ubiquitin-dependent transcriptional clock that is based upon the activation and destruction of transcriptional coactivators.

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Year:  2009        PMID: 19221049      PMCID: PMC2675955          DOI: 10.1210/me.2009-0015

Source DB:  PubMed          Journal:  Mol Endocrinol        ISSN: 0888-8809


  10 in total

Review 1.  Molecular analysis of mammalian circadian rhythms.

Authors:  S M Reppert; D R Weaver
Journal:  Annu Rev Physiol       Date:  2001       Impact factor: 19.318

2.  Circadian rhythms. Liver regeneration clocks on.

Authors:  Ueli Schibler
Journal:  Science       Date:  2003-10-10       Impact factor: 47.728

Review 3.  The expanding cosmos of nuclear receptor coactivators.

Authors:  David M Lonard; Bert W O'Malley
Journal:  Cell       Date:  2006-05-05       Impact factor: 41.582

Review 4.  A sense of time: how molecular clocks organize metabolism.

Authors:  Akira Kohsaka; Joseph Bass
Journal:  Trends Endocrinol Metab       Date:  2006-11-30       Impact factor: 12.015

5.  Rev-erbalpha, a heme sensor that coordinates metabolic and circadian pathways.

Authors:  Lei Yin; Nan Wu; Joshua C Curtin; Mohammed Qatanani; Nava R Szwergold; Robert A Reid; Gregory M Waitt; Derek J Parks; Kenneth H Pearce; G Bruce Wisely; Mitchell A Lazar
Journal:  Science       Date:  2007-11-15       Impact factor: 47.728

6.  SRC-3 coactivator functional lifetime is regulated by a phospho-dependent ubiquitin time clock.

Authors:  Ray-Chang Wu; Qin Feng; David M Lonard; Bert W O'Malley
Journal:  Cell       Date:  2007-06-15       Impact factor: 41.582

Review 7.  The mammalian circadian timing system: from gene expression to physiology.

Authors:  Frédéric Gachon; Emi Nagoshi; Steven A Brown; Juergen Ripperger; Ueli Schibler
Journal:  Chromosoma       Date:  2004-08-03       Impact factor: 4.316

8.  SRC-3 transcription-coupled activation, degradation, and the ubiquitin clock: is there enough coactivator to go around in cells?

Authors:  David M Lonard; Bert W O'Malley
Journal:  Sci Signal       Date:  2008-04-01       Impact factor: 8.192

9.  Identification of heme as the ligand for the orphan nuclear receptors REV-ERBalpha and REV-ERBbeta.

Authors:  Srilatha Raghuram; Keith R Stayrook; Pengxiang Huang; Pamela M Rogers; Amanda K Nosie; Don B McClure; Lorri L Burris; Sepideh Khorasanizadeh; Thomas P Burris; Fraydoon Rastinejad
Journal:  Nat Struct Mol Biol       Date:  2007-11-25       Impact factor: 15.369

10.  Atypical protein kinase C regulates dual pathways for degradation of the oncogenic coactivator SRC-3/AIB1.

Authors:  Ping Yi; Qin Feng; Larbi Amazit; David M Lonard; Sophia Y Tsai; Ming-Jer Tsai; Bert W O'Malley
Journal:  Mol Cell       Date:  2008-02-29       Impact factor: 17.970

  10 in total
  6 in total

1.  Tamoxifen increases nuclear respiratory factor 1 transcription by activating estrogen receptor beta and AP-1 recruitment to adjacent promoter binding sites.

Authors:  Margarita M Ivanova; Kristen H Luken; Amber S Zimmer; Felicia L Lenzo; Ryan J Smith; Maia W Arteel; Tara J Kollenberg; Kathleen A Mattingly; Carolyn M Klinge
Journal:  FASEB J       Date:  2011-01-13       Impact factor: 5.191

Review 2.  Nuclear receptor coactivators: structural and functional biochemistry.

Authors:  Yaroslava A Bulynko; Bert W O'Malley
Journal:  Biochemistry       Date:  2010-12-29       Impact factor: 3.162

3.  An innovative method to classify SERMs based on the dynamics of estrogen receptor transcriptional activity in living animals.

Authors:  Gianpaolo Rando; David Horner; Andrea Biserni; Balaji Ramachandran; Donatella Caruso; Paolo Ciana; Barry Komm; Adriana Maggi
Journal:  Mol Endocrinol       Date:  2010-03-02

4.  A SNP in steroid receptor coactivator-1 disrupts a GSK3β phosphorylation site and is associated with altered tamoxifen response in bone.

Authors:  R J Hartmaier; A S Richter; R M Gillihan; J Z Sallit; S E McGuire; J Wang; A V Lee; C K Osborne; B W O'Malley; P H Brown; J Xu; T C Skaar; S Philips; J M Rae; F Azzouz; L Li; J Hayden; N L Henry; A T Nguyen; V Stearns; D F Hayes; D A Flockhart; S Oesterreich
Journal:  Mol Endocrinol       Date:  2011-12-15

Review 5.  The function of steroid receptor coactivator-1 in normal tissues and cancer.

Authors:  Claire A Walsh; Li Qin; Jean Ching-Yi Tien; Leonie S Young; Jianming Xu
Journal:  Int J Biol Sci       Date:  2012-03-07       Impact factor: 6.580

6.  Imaging-Based Screening of Deubiquitinating Proteases Identifies Otubain-1 as a Stabilizer of c-MYC.

Authors:  Shannon E Moree; Laure Maneix; Polina Iakova; Fabio Stossi; Ergun Sahin; Andre Catic
Journal:  Cancers (Basel)       Date:  2022-02-04       Impact factor: 6.639

  6 in total

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