Literature DB >> 19209718

Unison: an integrated platform for computational biology discovery.

Reece K Hart1, Kiran Mukhyala.   

Abstract

This paper describes the design and applications of Unison, a comprehensive and integrated warehouse of protein sequences, diverse precomputed predictions, and other biological data. Unison provides a practical solution to the burden of preparing data for computational discovery projects, enables holistic feature-based mining queries regarding protein composition and functions, and provides a foundation for the development of new tools. Unison is available for immediate use online via direct database connections and a web interface. In addition, the database schema, command line tools, web interface, and non-proprietary precomputed predictions are released under the Academic Free License and available for download at http://unison-db.org/. This project has resulted in a system that significantly reduces several practical impediments to the initiation of computational biology discovery projects.

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Year:  2009        PMID: 19209718

Source DB:  PubMed          Journal:  Pac Symp Biocomput        ISSN: 2335-6928


  3 in total

1.  Flexible network reconstruction from relational databases with Cytoscape and CytoSQL.

Authors:  Kris Laukens; Jens Hollunder; Thanh Hai Dang; Geert De Jaeger; Martin Kuiper; Erwin Witters; Alain Verschoren; Koenraad Van Leemput
Journal:  BMC Bioinformatics       Date:  2010-07-01       Impact factor: 3.169

2.  The STARD9/Kif16a kinesin associates with mitotic microtubules and regulates spindle pole assembly.

Authors:  Jorge Z Torres; Matthew K Summers; David Peterson; Matthew J Brauer; James Lee; Silvia Senese; Ankur A Gholkar; Yu-Chen Lo; Xingye Lei; Kenneth Jung; David C Anderson; David P Davis; Lisa Belmont; Peter K Jackson
Journal:  Cell       Date:  2011-12-09       Impact factor: 41.582

3.  Bi-directional SIFT predicts a subset of activating mutations.

Authors:  William Lee; Yan Zhang; Kiran Mukhyala; Robert A Lazarus; Zemin Zhang
Journal:  PLoS One       Date:  2009-12-14       Impact factor: 3.240

  3 in total

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