Literature DB >> 19206091

Laser microdissection and its application to analyze gene expression in arbuscular mycorrhizal symbiosis.

S Karen Gomez1, Maria J Harrison.   

Abstract

Phosphorus is essential for plant growth, and in many soils phosphorus availability limits crop production. Most plants in natural ecosystems obtain phosphorus via a symbiotic partnership with arbuscular mycorrhizal (AM) fungi. While the significance of these associations is apparent, their molecular basis is poorly understood. Consequently, the potential to harness the mycorrhizal symbiosis to improve phosphorus nutrition in agriculture is not realized. Transcript profiling has recently been used to investigate gene expression changes that accompany development of the AM symbiosis. While these approaches have enabled the identification of AM-symbiosis-associated genes, they have generally involved the use of RNA from whole mycorrhizal roots. Laser microdissection techniques allow the dissection and capture of individual cells from a tissue. RNA can then be isolated from these samples and cell-type specific gene expression information can be obtained. This technology has been applied to obtain cells from plants and more recently to study plant-microbe interactions. The latter techniques, particularly those developed for root-microbe interactions, are of relevance to plant-parasitic weed research. Here, laser microdissection, its use in plant biology and in particular plant-microbe interactions are discussed. An overview of the AM symbiosis is then provided, with a focus on recent advances in understanding development of the arbuscule-cortical cell interface. Finally, the recent applications of laser microdissection for analyses of AM symbiosis are discussed.

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Year:  2009        PMID: 19206091     DOI: 10.1002/ps.1715

Source DB:  PubMed          Journal:  Pest Manag Sci        ISSN: 1526-498X            Impact factor:   4.845


  8 in total

1.  Gene expression in vessel-associated cells upon xylem embolism repair in Vitis vinifera L. petioles.

Authors:  Walter Chitarra; Raffaella Balestrini; Marco Vitali; Chiara Pagliarani; Irene Perrone; Andrea Schubert; Claudio Lovisolo
Journal:  Planta       Date:  2014-01-09       Impact factor: 4.116

2.  Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis.

Authors:  Emanuel A Devers; Anja Branscheid; Patrick May; Franziska Krajinski
Journal:  Plant Physiol       Date:  2011-05-13       Impact factor: 8.340

3.  Combining laser microdissection and RNA-seq to chart the transcriptional landscape of fungal development.

Authors:  Ines Teichert; Gabriele Wolff; Ulrich Kück; Minou Nowrousian
Journal:  BMC Genomics       Date:  2012-09-27       Impact factor: 3.969

4.  Revealing natural relationships among arbuscular mycorrhizal fungi: culture line BEG47 represents Diversispora epigaea, not Glomus versiforme.

Authors:  Arthur Schüssler; Manuela Krüger; Christopher Walker
Journal:  PLoS One       Date:  2011-08-11       Impact factor: 3.240

5.  Laser capture microdissection in Ectocarpus siliculosus: the pathway to cell-specific transcriptomics in brown algae.

Authors:  Denis Saint-Marcoux; Bernard Billoud; Jane A Langdale; Bénédicte Charrier
Journal:  Front Plant Sci       Date:  2015-02-10       Impact factor: 5.753

Review 6.  LysM Receptor-Like Kinase and LysM Receptor-Like Protein Families: An Update on Phylogeny and Functional Characterization.

Authors:  Luis Buendia; Ariane Girardin; Tongming Wang; Ludovic Cottret; Benoit Lefebvre
Journal:  Front Plant Sci       Date:  2018-10-24       Impact factor: 5.753

Review 7.  Single-Cell RNA Sequencing of Plant-Associated Bacterial Communities.

Authors:  Qin Ma; Heike Bücking; Jose L Gonzalez Hernandez; Senthil Subramanian
Journal:  Front Microbiol       Date:  2019-10-29       Impact factor: 5.640

8.  Functional genomics of a generalist parasitic plant: laser microdissection of host-parasite interface reveals host-specific patterns of parasite gene expression.

Authors:  Loren A Honaas; Eric K Wafula; Zhenzhen Yang; Joshua P Der; Norman J Wickett; Naomi S Altman; Christopher G Taylor; John I Yoder; Michael P Timko; James H Westwood; Claude W dePamphilis
Journal:  BMC Plant Biol       Date:  2013-01-09       Impact factor: 4.215

  8 in total

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