Literature DB >> 19203580

Topology and regulation of the human eIF4A/4G/4H helicase complex in translation initiation.

Assen Marintchev1, Katherine A Edmonds, Boriana Marintcheva, Elthea Hendrickson, Monika Oberer, Chikako Suzuki, Barbara Herdy, Nahum Sonenberg, Gerhard Wagner.   

Abstract

The RNA helicase eIF4A plays a key role in unwinding of mRNA and scanning during translation initiation. Free eIF4A is a poor helicase and requires the accessory proteins eIF4G and eIF4H. However, the structure of the helicase complex and the mechanisms of stimulation of eIF4A activity have remained elusive. Here we report the topology of the eIF4A/4G/4H helicase complex, which is built from multiple experimentally observed domain-domain contacts. Remarkably, some of the interactions are continuously rearranged during the ATP binding/hydrolysis cycle of the helicase. We show that the accessory proteins modulate the affinity of eIF4A for ATP by interacting simultaneously with both helicase domains and promoting either the closed, ATP-bound conformation or the open, nucleotide-free conformation. The topology of the complex and the spatial arrangement of the RNA-binding surfaces offer insights into their roles in stimulation of helicase activity and the mechanisms of mRNA unwinding and scanning.

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Year:  2009        PMID: 19203580      PMCID: PMC2656774          DOI: 10.1016/j.cell.2009.01.014

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  30 in total

1.  Characterization of a novel RNA-binding region of eIF4GI critical for ribosomal scanning.

Authors:  Déborah Prévôt; Didier Décimo; Cécile H Herbreteau; Florence Roux; Jérôme Garin; Jean-Luc Darlix; Théophile Ohlmann
Journal:  EMBO J       Date:  2003-04-15       Impact factor: 11.598

2.  Ribosome loading onto the mRNA cap is driven by conformational coupling between eIF4G and eIF4E.

Authors:  John D Gross; Nathan J Moerke; Tobias von der Haar; Alexey A Lugovskoy; Alan B Sachs; John E G McCarthy; Gerhard Wagner
Journal:  Cell       Date:  2003-12-12       Impact factor: 41.582

3.  A general framework for development and data analysis of competitive high-throughput screens for small-molecule inhibitors of protein-protein interactions by fluorescence polarization.

Authors:  Michael H A Roehrl; Julia Y Wang; Gerhard Wagner
Journal:  Biochemistry       Date:  2004-12-28       Impact factor: 3.162

4.  Purification and characterization of a new eukaryotic protein translation factor. Eukaryotic initiation factor 4H.

Authors:  N J Richter-Cook; T E Dever; J O Hensold; W C Merrick
Journal:  J Biol Chem       Date:  1998-03-27       Impact factor: 5.157

5.  The DEAD box protein eIF4A. 2. A cycle of nucleotide and RNA-dependent conformational changes.

Authors:  J R Lorsch; D Herschlag
Journal:  Biochemistry       Date:  1998-02-24       Impact factor: 3.162

6.  The DEAD box protein eIF4A. 1. A minimal kinetic and thermodynamic framework reveals coupled binding of RNA and nucleotide.

Authors:  J R Lorsch; D Herschlag
Journal:  Biochemistry       Date:  1998-02-24       Impact factor: 3.162

7.  Human eukaryotic translation initiation factor 4G (eIF4G) possesses two separate and independent binding sites for eIF4A.

Authors:  H Imataka; N Sonenberg
Journal:  Mol Cell Biol       Date:  1997-12       Impact factor: 4.272

8.  RNA-stimulated ATPase activity of eukaryotic initiation factors.

Authors:  J A Grifo; R D Abramson; C A Satler; W C Merrick
Journal:  J Biol Chem       Date:  1984-07-10       Impact factor: 5.157

9.  Mapping of functional domains in eukaryotic protein synthesis initiation factor 4G (eIF4G) with picornaviral proteases. Implications for cap-dependent and cap-independent translational initiation.

Authors:  B J Lamphear; R Kirchweger; T Skern; R E Rhoads
Journal:  J Biol Chem       Date:  1995-09-15       Impact factor: 5.157

10.  Dominant negative mutants of mammalian translation initiation factor eIF-4A define a critical role for eIF-4F in cap-dependent and cap-independent initiation of translation.

Authors:  A Pause; N Méthot; Y Svitkin; W C Merrick; N Sonenberg
Journal:  EMBO J       Date:  1994-03-01       Impact factor: 11.598

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  124 in total

Review 1.  Translational regulation in nutrigenomics.

Authors:  Botao Liu; Shu-Bing Qian
Journal:  Adv Nutr       Date:  2011-11-03       Impact factor: 8.701

Review 2.  A mechanistic overview of translation initiation in eukaryotes.

Authors:  Colin Echeverría Aitken; Jon R Lorsch
Journal:  Nat Struct Mol Biol       Date:  2012-06-05       Impact factor: 15.369

3.  The eukaryotic initiation factor (eIF) 4G HEAT domain promotes translation re-initiation in yeast both dependent on and independent of eIF4A mRNA helicase.

Authors:  Ryosuke Watanabe; Marcelo Jun Murai; Chingakham Ranjit Singh; Stephanie Fox; Miki Ii; Katsura Asano
Journal:  J Biol Chem       Date:  2010-05-12       Impact factor: 5.157

4.  UAP56 is an important regulator of protein synthesis and growth in cardiomyocytes.

Authors:  Abha Sahni; Nadan Wang; Jeffrey D Alexis
Journal:  Biochem Biophys Res Commun       Date:  2010-01-29       Impact factor: 3.575

5.  Bypassing of stems versus linear base-by-base inspection of mammalian mRNAs during ribosomal scanning.

Authors:  Irina S Abaeva; Assen Marintchev; Vera P Pisareva; Christopher U T Hellen; Tatyana V Pestova
Journal:  EMBO J       Date:  2010-11-26       Impact factor: 11.598

6.  The 5'-7-methylguanosine cap on eukaryotic mRNAs serves both to stimulate canonical translation initiation and to block an alternative pathway.

Authors:  Sarah F Mitchell; Sarah E Walker; Mikkel A Algire; Eun-Hee Park; Alan G Hinnebusch; Jon R Lorsch
Journal:  Mol Cell       Date:  2010-09-24       Impact factor: 17.970

Review 7.  The role of the poly(A) binding protein in the assembly of the Cap-binding complex during translation initiation in plants.

Authors:  Daniel R Gallie
Journal:  Translation (Austin)       Date:  2014-10-30

8.  Identification and characterization of functionally critical, conserved motifs in the internal repeats and N-terminal domain of yeast translation initiation factor 4B (yeIF4B).

Authors:  Fujun Zhou; Sarah E Walker; Sarah F Mitchell; Jon R Lorsch; Alan G Hinnebusch
Journal:  J Biol Chem       Date:  2013-11-27       Impact factor: 5.157

Review 9.  Regulation of translation initiation in eukaryotes: mechanisms and biological targets.

Authors:  Nahum Sonenberg; Alan G Hinnebusch
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

10.  Backbone resonance assignment of the HEAT1-domain of the human eukaryotic translation initiation factor 4GI.

Authors:  Sabine R Akabayov; Gerhard Wagner
Journal:  Biomol NMR Assign       Date:  2013-01-17       Impact factor: 0.746

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