Literature DB >> 19202193

Bioinformatics for next generation sequencing.

Alex Bateman, John Quackenbush.   

Abstract

Mesh：

Year:  2009        PMID： 19202193     DOI： 10.1093/bioinformatics/btp037

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


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  8 in total

1.  Key considerations for measuring allelic expression on a genomic scale using high-throughput sequencing.

Authors:  Pierre Fontanillas; Christian R Landry; Patricia J Wittkopp; Carsten Russ; Jonathan D Gruber; Chad Nusbaum; Daniel L Hartl
Journal:  Mol Ecol       Date:  2010-03       Impact factor: 6.185

Review 2.  Application of next generation sequencing to human gene fusion detection: computational tools, features and perspectives.

Authors:  Qingguo Wang; Junfeng Xia; Peilin Jia; William Pao; Zhongming Zhao
Journal:  Brief Bioinform       Date:  2012-08-09       Impact factor: 11.622

Review 3.  High throughput sequencing approaches to mutation discovery in the mouse.

Authors:  Michelle M Simon; Ann-Marie Mallon; Gareth R Howell; Laura G Reinholdt
Journal:  Mamm Genome       Date:  2012-09-19       Impact factor: 2.957

4.  BIGpre: a quality assessment package for next-generation sequencing data.

Authors:  Tongwu Zhang; Yingfeng Luo; Kan Liu; Linlin Pan; Bing Zhang; Jun Yu; Songnian Hu
Journal:  Genomics Proteomics Bioinformatics       Date:  2011-12       Impact factor: 7.691

5.  Human complex trait genetics: lifting the lid of the genomics toolbox - from pathways to prediction.

Authors:  Suzanne J Rowe; Albert Tenesa
Journal:  Curr Genomics       Date:  2012-05       Impact factor: 2.236

Review 6.  Next generation sequencing applications for breast cancer research.

Authors:  Roxana Cojocneanu Petric; Laura-Ancuta Pop; Ancuta Jurj; Lajos Raduly; Dan Dumitrascu; Nicolae Dragos; Ioana Berindan Neagoe
Journal:  Clujul Med       Date:  2015-07-01

7.  Interactive knowledge discovery and data mining on genomic expression data with numeric formal concept analysis.

Authors:  Jose M González-Calabozo; Francisco J Valverde-Albacete; Carmen Peláez-Moreno
Journal:  BMC Bioinformatics       Date:  2016-09-15       Impact factor: 3.169

8.  The Genomic Scrapheap Challenge; Extracting Relevant Data from Unmapped Whole Genome Sequencing Reads, Including Strain Specific Genomic Segments, in Rats.

Authors:  Robin H van der Weide; Marieke Simonis; Roel Hermsen; Pim Toonen; Edwin Cuppen; Joep de Ligt
Journal:  PLoS One       Date:  2016-08-08       Impact factor: 3.240
  8 in total

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