Literature DB >> 19196758

Sciscionella marina gen. nov., sp. nov., a marine actinomycete isolated from a sediment in the northern South China Sea.

Xin-Peng Tian1, Xiao-Yang Zhi, Yun-Qi Qiu, Yu-Qin Zhang, Shu-Kun Tang, Li-Hua Xu, Si Zhang, Wen-Jun Li.   

Abstract

The taxonomic position of an actinomycete, designated SCSIO 00231(T), isolated from a sediment sample collected from the northern South China Sea, was determined by using a polyphasic approach. The organism formed fragmented substrate hyphae and sparse aerial mycelium on modified ISP 2 medium. Phylogenetic analysis based on the 16S rRNA gene sequence showed that strain SCSIO 00231(T) fell into the family Pseudonocardiaceae, in which it formed a distinct lineage and was loosely associated with Thermocrispum municipale DSM 44069(T), with 93 % similarity. The other closest phylogenetic neighbours were Saccharopolyspora erythraea NRRL 2338(T) (92.6 % similarity) and Amycolatopsis sacchari DSM 44468(T) (93.1 % similarity). The isolate had cell-wall type IV (meso-diaminopimelic acid and whole-cell sugars arabinose, galactose and glucose) and phospholipid type III. The predominant menaquinone was MK-9(H(4)). The G+C content of the genomic DNA was 69 mol%. Based on these data, strain SCSIO 00231(T) can be readily distinguished from previously described organisms and represents a new genus within the family Pseudonocardiaceae. The name Sciscionella gen. nov. is proposed, with the novel species Sciscionella marina sp. nov. The type strain of Sciscionella marina is SCSIO 00231(T) (=KCTC 19433(T) =CCTCC AA208009(T)).

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Year:  2009        PMID: 19196758     DOI: 10.1099/ijs.0.001982-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  10 in total

1.  Spatial variation of bacterial community structure of the Northern South China Sea in relation to water chemistry.

Authors:  Juan Ling; Jun-De Dong; You-Shao Wang; Yan-Ying Zhang; Chao Deng; Li Lin; Mei-Lin Wu; Fu-Lin Sun
Journal:  Ecotoxicology       Date:  2012-06-17       Impact factor: 2.823

2.  Genome-Based Taxonomic Classification of the Phylum Actinobacteria.

Authors:  Imen Nouioui; Lorena Carro; Marina García-López; Jan P Meier-Kolthoff; Tanja Woyke; Nikos C Kyrpides; Rüdiger Pukall; Hans-Peter Klenk; Michael Goodfellow; Markus Göker
Journal:  Front Microbiol       Date:  2018-08-22       Impact factor: 5.640

Review 3.  The marine actinomycete genus Salinispora: a model organism for secondary metabolite discovery.

Authors:  Paul R Jensen; Bradley S Moore; William Fenical
Journal:  Nat Prod Rep       Date:  2015-05       Impact factor: 13.423

4.  Construction and preliminary analysis of a deep-sea sediment metagenomic fosmid library from Qiongdongnan Basin, South China Sea.

Authors:  Yongfei Hu; Chengzhang Fu; Yeshi Yin; Gong Cheng; Fang Lei; Xi Yang; Jing Li; Elizabeth Jane Ashforth; Lixin Zhang; Baoli Zhu
Journal:  Mar Biotechnol (NY)       Date:  2010-06-01       Impact factor: 3.619

5.  Marine Actinobacteria from the Gulf of California: diversity, abundance and secondary metabolite biosynthetic potential.

Authors:  Amayaly Becerril-Espinosa; Kelle C Freel; Paul R Jensen; Irma E Soria-Mercado
Journal:  Antonie Van Leeuwenhoek       Date:  2012-12-11       Impact factor: 2.271

6.  Targeted search for actinomycetes from nearshore and deep-sea marine sediments.

Authors:  Alejandra Prieto-Davó; Luis J Villarreal-Gómez; Stephanie Forschner-Dancause; Alan T Bull; James E M Stach; David C Smith; Dave C Rowley; Paul R Jensen
Journal:  FEMS Microbiol Ecol       Date:  2013-03-11       Impact factor: 4.194

7.  Pseudonocardians A-C, new diazaanthraquinone derivatives from a deap-sea actinomycete Pseudonocardia sp. SCSIO 01299.

Authors:  Sumei Li; Xinpeng Tian; Siwen Niu; Wenjun Zhang; Yuchan Chen; Haibo Zhang; Xianwen Yang; Weimin Zhang; Wenjun Li; Si Zhang; Jianhua Ju; Changsheng Zhang
Journal:  Mar Drugs       Date:  2011-08-23       Impact factor: 6.085

Review 8.  Deep Sea Actinomycetes and Their Secondary Metabolites.

Authors:  Manita Kamjam; Periyasamy Sivalingam; Zinxin Deng; Kui Hong
Journal:  Front Microbiol       Date:  2017-05-01       Impact factor: 5.640

Review 9.  Linking species concepts to natural product discovery in the post-genomic era.

Authors:  Paul R Jensen
Journal:  J Ind Microbiol Biotechnol       Date:  2009-12-24       Impact factor: 3.346

10.  Culturable diversity and antimicrobial activity of Actinobacteria from marine sediments in Valparaíso bay, Chile.

Authors:  Fernanda P Claverías; Agustina Undabarrena; Myriam González; Michael Seeger; Beatriz Cámara
Journal:  Front Microbiol       Date:  2015-07-28       Impact factor: 5.640

  10 in total

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