Literature DB >> 19196049

The unusual way to make a genetically active nucleus.

Franziska Jönsson1, Jan Postberg, Hans J Lipps.   

Abstract

During macronuclear differentiation in ciliated protozoa, extensive DNA rearrangement and DNA excision processes occur, and these are most profound in stichotrichous ciliates, such as Stylonychia or Oxytricha. This review describes the morphological and molecular events taking place during macronuclear development in stichotrichous ciliates. Various models for the regulation of macronuclear differentiation have been proposed and will be discussed here. Finally, an attempt to speculate about the biological consequences of these rearrangement and excision processes will be made. Because specific elimination of DNA sequences not required in the differentiated nucleus can be regarded as the most extreme form of gene silencing, results obtained in these cells may also be relevant for our understanding of differentiation processes in higher eukaryotic organisms.

Mesh:

Year:  2009        PMID: 19196049     DOI: 10.1089/dna.2008.0806

Source DB:  PubMed          Journal:  DNA Cell Biol        ISSN: 1044-5498            Impact factor:   3.311


  12 in total

1.  Alternative processing of scrambled genes generates protein diversity in the ciliate Chilodonella uncinata.

Authors:  Laura A Katz; Alexandra M Kovner
Journal:  J Exp Zool B Mol Dev Evol       Date:  2010-09-15       Impact factor: 2.656

Review 2.  Insights into transgenerational epigenetics from studies of ciliates.

Authors:  Olivia A Pilling; Anna J Rogers; Bethaney Gulla-Devaney; Laura A Katz
Journal:  Eur J Protistol       Date:  2017-05-16       Impact factor: 3.020

Review 3.  Macronuclear development in ciliates, with a focus on nuclear architecture.

Authors:  Ragib Ahsan; Wumei Blanche; Laura A Katz
Journal:  J Eukaryot Microbiol       Date:  2022-03-16       Impact factor: 3.880

Review 4.  An evolutionary balance: conservation vs innovation in ciliate membrane trafficking.

Authors:  Sabrice Guerrier; Helmut Plattner; Elisabeth Richardson; Joel B Dacks; Aaron P Turkewitz
Journal:  Traffic       Date:  2016-10-27       Impact factor: 6.215

5.  The evolutionary history of histone H3 suggests a deep eukaryotic root of chromatin modifying mechanisms.

Authors:  Jan Postberg; Sakeh Forcob; Wei-Jen Chang; Hans J Lipps
Journal:  BMC Evol Biol       Date:  2010-08-25       Impact factor: 3.260

6.  Exploiting Oxytricha trifallax nanochromosomes to screen for non-coding RNA genes.

Authors:  Seolkyoung Jung; Estienne C Swart; Patrick J Minx; Vincent Magrini; Elaine R Mardis; Laura F Landweber; Sean R Eddy
Journal:  Nucleic Acids Res       Date:  2011-06-28       Impact factor: 16.971

7.  Twisted Tales: Insights into Genome Diversity of Ciliates Using Single-Cell 'Omics.

Authors:  Xyrus X Maurer-Alcalá; Ying Yan; Olivia A Pilling; Rob Knight; Laura A Katz
Journal:  Genome Biol Evol       Date:  2018-08-01       Impact factor: 3.416

8.  Histone modifications are specifically relocated during gene activation and nuclear differentiation.

Authors:  Katharina Sarah Heyse; Susanne Erika Weber; Hans-Joachim Lipps
Journal:  BMC Genomics       Date:  2009-11-24       Impact factor: 3.969

9.  A permissive chromatin structure is adopted prior to site-specific DNA demethylation of developmentally expressed genes involved in macronuclear differentiation.

Authors:  Aneta Bulic; Jan Postberg; Andreas Fischer; Franziska Jönsson; Günter Reuter; Hans J Lipps
Journal:  Epigenetics Chromatin       Date:  2013-03-05       Impact factor: 4.954

10.  27nt-RNAs guide histone variant deposition via 'RNA-induced DNA replication interference' and thus transmit parental genome partitioning in Stylonychia.

Authors:  Jan Postberg; Franziska Jönsson; Patrick Philipp Weil; Aneta Bulic; Stefan Andreas Juranek; Hans-Joachim Lipps
Journal:  Epigenetics Chromatin       Date:  2018-06-12       Impact factor: 4.954

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