Literature DB >> 19194010

Crystallization and preliminary X-ray studies of the chromophore-binding domain of cyanobacteriochrome AnPixJ from Anabaena sp. PCC 7120.

Rei Narikawa1, Norifumi Muraki, Tomoo Shiba, Masahiko Ikeuchi, Genji Kurisu.   

Abstract

Cyanobacteriochromes form a recently defined superfamily of tetrapyrrole-based photoreceptors that are distantly related to conventional red/far-red photoreceptor phytochromes. Among these molecules, AnPixJ from Anabaena sp. PCC 7120 is a novel photoreceptor that shows reversible photoconversion between green-absorbing and red-absorbing forms, which is in contrast to the properties of conventional phytochromes. In order to better understand the structural basis of this unique photoconversion mechanism, the chromophore-binding domain of AnPixJ (AnPixJ-GAF2) was heterologously overproduced and purified, and crystallization of both forms was attempted. Blue crystals of the red-absorbing form of AnPixJ-GAF2 were successfully obtained; they belonged to space group P4(3)2(1)2 and contained one monomer per asymmetric unit. Diffraction data were collected to a resolution of 1.8 A using synchrotron-radiation beamline BL-5A at the Photon Factory.

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Year:  2009        PMID: 19194010      PMCID: PMC2635879          DOI: 10.1107/S1744309108044151

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  22 in total

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Authors:  M Y Galperin; A N Nikolskaya; E V Koonin
Journal:  FEMS Microbiol Lett       Date:  2001-09-11       Impact factor: 2.742

Review 2.  Phytochrome ancestry: sensors of bilins and light.

Authors:  Beronda L Montgomery; J Clark Lagarias
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3.  The CCP4 suite: programs for protein crystallography.

Authors: 
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4.  A light-sensing knot revealed by the structure of the chromophore-binding domain of phytochrome.

Authors:  Jeremiah R Wagner; Joseph S Brunzelle; Katrina T Forest; Richard D Vierstra
Journal:  Nature       Date:  2005-11-17       Impact factor: 49.962

5.  Cyanobacterial phytochrome-like PixJ1 holoprotein shows novel reversible photoconversion between blue- and green-absorbing forms.

Authors:  Shizue Yoshihara; Mitsunori Katayama; Xiaoxing Geng; Masahiko Ikeuchi
Journal:  Plant Cell Physiol       Date:  2004-12       Impact factor: 4.927

6.  Metabolic engineering to produce phytochromes with phytochromobilin, phycocyanobilin, or phycoerythrobilin chromophore in Escherichia coli.

Authors:  Keiko Mukougawa; Hirosuke Kanamoto; Toshikazu Kobayashi; Akiho Yokota; Takayuki Kohchi
Journal:  FEBS Lett       Date:  2006-01-26       Impact factor: 4.124

7.  Characterization of genes encoding multi-domain proteins in the genome of the filamentous nitrogen-fixing Cyanobacterium anabaena sp. strain PCC 7120.

Authors:  M Ohmori; M Ikeuchi; N Sato; P Wolk; T Kaneko; T Ogawa; M Kanehisa; S Goto; S Kawashima; S Okamoto; H Yoshimura; H Katoh; T Fujisawa; S Ehira; A Kamei; S Yoshihara; R Narikawa; S Tabat
Journal:  DNA Res       Date:  2001-12-31       Impact factor: 4.458

8.  Reconstitution of blue-green reversible photoconversion of a cyanobacterial photoreceptor, PixJ1, in phycocyanobilin-producing Escherichia coli.

Authors:  Shizue Yoshihara; Takashi Shimada; Daisuke Matsuoka; Kazunori Zikihara; Takayuki Kohchi; Satoru Tokutomi
Journal:  Biochemistry       Date:  2006-03-21       Impact factor: 3.162

Review 9.  Phototactic motility in the unicellular cyanobacterium Synechocystis sp. PCC 6803.

Authors:  Shizue Yoshihara; Masahiko Ikeuchi
Journal:  Photochem Photobiol Sci       Date:  2004-05-11       Impact factor: 3.982

10.  Phytochrome from Agrobacterium tumefaciens has unusual spectral properties and reveals an N-terminal chromophore attachment site.

Authors:  Tilman Lamparter; Norbert Michael; Franz Mittmann; Berta Esteban
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-19       Impact factor: 11.205

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  4 in total

1.  Structures of cyanobacteriochromes from phototaxis regulators AnPixJ and TePixJ reveal general and specific photoconversion mechanism.

Authors:  Rei Narikawa; Takami Ishizuka; Norifumi Muraki; Tomoo Shiba; Genji Kurisu; Masahiko Ikeuchi
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-19       Impact factor: 11.205

2.  A far-red cyanobacteriochrome lineage specific for verdins.

Authors:  Marcus V Moreno; Nathan C Rockwell; Manuel Mora; Andrew J Fisher; J Clark Lagarias
Journal:  Proc Natl Acad Sci U S A       Date:  2020-10-26       Impact factor: 11.205

3.  A biliverdin-binding cyanobacteriochrome from the chlorophyll d-bearing cyanobacterium Acaryochloris marina.

Authors:  Rei Narikawa; Takahiro Nakajima; Yuki Aono; Keiji Fushimi; Gen Enomoto; Shigeru Itoh; Moritoshi Sato; Masahiko Ikeuchi
Journal:  Sci Rep       Date:  2015-01-22       Impact factor: 4.379

4.  An Engineered Biliverdin-Compatible Cyanobacteriochrome Enables a Unique Ultrafast Reversible Photoswitching Pathway.

Authors:  Sean R Tachibana; Longteng Tang; Liangdong Zhu; Yuka Takeda; Keiji Fushimi; Yoshibumi Ueda; Takahiro Nakajima; Yuto Kuwasaki; Moritoshi Sato; Rei Narikawa; Chong Fang
Journal:  Int J Mol Sci       Date:  2021-05-16       Impact factor: 5.923

  4 in total

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