Literature DB >> 19193993

Crystallization and X-ray analysis of human cytoplasmic phenylalanyl-tRNA synthetase.

Igal Finarov1, Nina Moor, Naama Kessler, Mark Safro.   

Abstract

Human cytosolic phenylalanyl-tRNA synthetase (hcPheRS) is responsible for the covalent attachment of phenylalanine to its cognate tRNA(Phe). Significant differences between the amino-acid sequences of eukaryotic and prokaryotic PheRSs indicate that the domain composition of hcPheRS differs from that of the Thermus thermophilus analogue. As a consequence of the absence of the anticodon-recognizing B8 domain, the binding mode of tRNA(Phe) to hcPheRS is expected to differ from that in prokaryotes. Recombinant hcPheRS protein was purified to homogeneity and crystallized. The crystals used for structure determination diffracted to 3.3 A resolution and belonged to space group C2, with unit-cell parameters a = 362.9, b = 213.6, c = 212.7 A, beta = 125.2 degrees . The structure of hcPheRS was determined by the molecular-replacement method in combination with phase information from multiwavelength anomalous dispersion.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19193993      PMCID: PMC2635853          DOI: 10.1107/S1744309108042425

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  18 in total

1.  Rapid automated molecular replacement by evolutionary search.

Authors:  C R Kissinger; D K Gehlhaar; D B Fogel
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-02

2.  Implementation of molecular replacement in AMoRe.

Authors:  J Navaza
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2001-09-21

Review 3.  Aminoacyl-tRNA synthesis.

Authors:  M Ibba; D Soll
Journal:  Annu Rev Biochem       Date:  2000       Impact factor: 23.643

4.  Matthews coefficient probabilities: Improved estimates for unit cell contents of proteins, DNA, and protein-nucleic acid complex crystals.

Authors:  Katherine A Kantardjieff; Bernhard Rupp
Journal:  Protein Sci       Date:  2003-09       Impact factor: 6.725

Review 5.  Aminoacyl-tRNA synthetase family from prokaryotes and eukaryotes: structural domains and their implications.

Authors:  M Mirande
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1991

6.  Structural and mutational studies of the amino acid-editing domain from archaeal/eukaryal phenylalanyl-tRNA synthetase.

Authors:  Hiroshi M Sasaki; Shun-ichi Sekine; Toru Sengoku; Ryuya Fukunaga; Motoyuki Hattori; Yukiko Utsunomiya; Chizu Kuroishi; Seiki Kuramitsu; Mikako Shirouzu; Shigeyuki Yokoyama
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-26       Impact factor: 11.205

7.  Cloning and expression of human phenylalanyl-tRNA synthetase in Escherichia coli: comparative study of purified recombinant enzymes.

Authors:  Nina Moor; Gregory Linshiz; Mark Safro
Journal:  Protein Expr Purif       Date:  2002-03       Impact factor: 1.650

8.  Human phenylalanyl-tRNA synthetase: cloning, characterization of the deduced amino acid sequences in terms of the structural domains and coordinately regulated expression of the alpha and beta subunits in chronic myeloid leukemia cells.

Authors:  M Rodova; V Ankilova; M G Safro
Journal:  Biochem Biophys Res Commun       Date:  1999-02-24       Impact factor: 3.575

9.  The tRNA-induced conformational activation of human mitochondrial phenylalanyl-tRNA synthetase.

Authors:  Liron Klipcan; Inna Levin; Naama Kessler; Nina Moor; Igal Finarov; Mark Safro
Journal:  Structure       Date:  2008-07       Impact factor: 5.006

10.  Solving structures of protein complexes by molecular replacement with Phaser.

Authors:  Airlie J McCoy
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2006-12-13
View more
  1 in total

1.  A translation-independent function of PheRS activates growth and proliferation in Drosophila.

Authors:  Manh Tin Ho; Jiongming Lu; Dominique Brunßen; Beat Suter
Journal:  Dis Model Mech       Date:  2021-03-18       Impact factor: 5.758

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.