Literature DB >> 19188056

Regulation of peroxisome dynamics.

Jennifer J Smith1, John D Aitchison.   

Abstract

Peroxisomes are single-membraned organelles ubiquitous to eukaryotic cells that house metabolic reactions that generate and destroy harmful oxidative intermediates. They are dynamic structures whose morphology, abundance, composition, and function depend on the cell type and environment. Perhaps due to the potentially damaging and protective metabolic roles of peroxisomes and their dynamic presence in the cell, peroxisome biogenesis is emerging as a process that involves complex underlying mechanisms of regulated formation and maintenance. There are roughly 30 known peroxins, proteins involved in peroxisome biogenesis, many of which have been conserved from yeast to mammals. This review focuses on the biogenesis of peroxisomes with an emphasis on the regulation of peroxisome formation and the import of peroxisomal matrix proteins in the model organism Saccharomyces cerevisiae.

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Year:  2009        PMID: 19188056      PMCID: PMC2681484          DOI: 10.1016/j.ceb.2009.01.009

Source DB:  PubMed          Journal:  Curr Opin Cell Biol        ISSN: 0955-0674            Impact factor:   8.382


  69 in total

1.  Characterization of peroxisomal Pex5p from rat liver. Pex5p in the Pex5p-Pex14p membrane complex is a transmembrane protein.

Authors:  A M Gouveia; C Reguenga; M E Oliveira; C Sa-Miranda; J E Azevedo
Journal:  J Biol Chem       Date:  2000-10-20       Impact factor: 5.157

2.  Pex8p, an intraperoxisomal peroxin of Saccharomyces cerevisiae required for protein transport into peroxisomes binds the PTS1 receptor pex5p.

Authors:  P Rehling; A Skaletz-Rorowski; W Girzalsky; T Voorn-Brouwer; M M Franse; B Distel; M Veenhuis; W H Kunau; R Erdmann
Journal:  J Biol Chem       Date:  2000-02-04       Impact factor: 5.157

3.  Physical interactions of the peroxisomal targeting signal 1 receptor pex5p, studied by fluorescence correlation spectroscopy.

Authors:  Dongyuan Wang; Nina V Visser; Marten Veenhuis; Ida J van der Klei
Journal:  J Biol Chem       Date:  2003-08-20       Impact factor: 5.157

Review 4.  The biochemistry of oleate induction: transcriptional upregulation and peroxisome proliferation.

Authors:  Aner Gurvitz; Hanspeter Rottensteiner
Journal:  Biochim Biophys Acta       Date:  2006-07-26

5.  The Saccharomyces cerevisiae peroxisomal import receptor Pex5p is monoubiquitinated in wild type cells.

Authors:  Astrid Kragt; Tineke Voorn-Brouwer; Marlene van den Berg; Ben Distel
Journal:  J Biol Chem       Date:  2005-01-04       Impact factor: 5.157

6.  Saccharomyces cerevisiae peroxisomal thiolase is imported as a dimer.

Authors:  J R Glover; D W Andrews; R A Rachubinski
Journal:  Proc Natl Acad Sci U S A       Date:  1994-10-25       Impact factor: 11.205

Review 7.  Biogenesis of peroxisomes.

Authors:  P B Lazarow; Y Fujiki
Journal:  Annu Rev Cell Biol       Date:  1985

8.  Ubiquitination of the peroxisomal targeting signal type 1 receptor, Pex5p, suggests the presence of a quality control mechanism during peroxisomal matrix protein import.

Authors:  Jan A K W Kiel; Kerstin Emmrich; Helmut E Meyer; Wolf-H Kunau
Journal:  J Biol Chem       Date:  2004-11-09       Impact factor: 5.157

9.  Pex30p, Pex31p, and Pex32p form a family of peroxisomal integral membrane proteins regulating peroxisome size and number in Saccharomyces cerevisiae.

Authors:  Franco J Vizeacoumar; Juan C Torres-Guzman; David Bouard; John D Aitchison; Richard A Rachubinski
Journal:  Mol Biol Cell       Date:  2003-11-14       Impact factor: 4.138

10.  Pex7p translocates in and out of peroxisomes in Saccharomyces cerevisiae.

Authors:  Devi M Nair; P Edward Purdue; Paul B Lazarow
Journal:  J Cell Biol       Date:  2004-11-15       Impact factor: 10.539

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  23 in total

Review 1.  Rearrangements of the transcriptional regulatory networks of metabolic pathways in fungi.

Authors:  Hugo Lavoie; Hervé Hogues; Malcolm Whiteway
Journal:  Curr Opin Microbiol       Date:  2009-10-29       Impact factor: 7.934

2.  Dynamic changes in the subcellular distribution of Gpd1p in response to cell stress.

Authors:  Sunhee Jung; Marcello Marelli; Richard A Rachubinski; David R Goodlett; John D Aitchison
Journal:  J Biol Chem       Date:  2009-12-21       Impact factor: 5.157

3.  Integrated phosphoproteomics analysis of a signaling network governing nutrient response and peroxisome induction.

Authors:  Ramsey A Saleem; Richard S Rogers; Alexander V Ratushny; David J Dilworth; Paul T Shannon; David Shteynberg; Yakun Wan; Robert L Moritz; Alexey I Nesvizhskii; Richard A Rachubinski; John D Aitchison
Journal:  Mol Cell Proteomics       Date:  2010-04-15       Impact factor: 5.911

4.  Ubiquitin chain elongation enzyme Ufd2 regulates a subset of Doa10 substrates.

Authors:  Chang Liu; Dewald van Dyk; Ping Xu; Vitnary Choe; Haihui Pan; Junmin Peng; Brenda Andrews; Hai Rao
Journal:  J Biol Chem       Date:  2010-02-16       Impact factor: 5.157

5.  Robustness and evolvability in natural chemical resistance: identification of novel systems properties, biochemical mechanisms and regulatory interactions.

Authors:  Thiago M Venancio; S Balaji; S Geetha; L Aravind
Journal:  Mol Biosyst       Date:  2010-06-02

6.  Germ cells of male mice express genes for peroxisomal metabolic pathways implicated in the regulation of spermatogenesis and the protection against oxidative stress.

Authors:  Sandra Dastig; Anca Nenicu; David M Otte; Andreas Zimmer; Jürgen Seitz; Eveline Baumgart-Vogt; Georg H Lüers
Journal:  Histochem Cell Biol       Date:  2011-09-07       Impact factor: 4.304

7.  Genome-wide analysis of effectors of peroxisome biogenesis.

Authors:  Ramsey A Saleem; Rose Long-O'Donnell; David J Dilworth; Abraham M Armstrong; Arvind P Jamakhandi; Yakun Wan; Theo A Knijnenburg; Antti Niemistö; John Boyle; Richard A Rachubinski; Ilya Shmulevich; John D Aitchison
Journal:  PLoS One       Date:  2010-08-04       Impact factor: 3.240

Review 8.  Peroxisomes take shape.

Authors:  Jennifer J Smith; John D Aitchison
Journal:  Nat Rev Mol Cell Biol       Date:  2013-12       Impact factor: 94.444

9.  Peroxisomal biogenesis in ischemic brain.

Authors:  Jennifer M Young; Jonathan W Nelson; Jian Cheng; Wenri Zhang; Sarah Mader; Catherine M Davis; Richard S Morrison; Nabil J Alkayed
Journal:  Antioxid Redox Signal       Date:  2015-01-10       Impact factor: 8.401

10.  Pex3 peroxisome biogenesis proteins function in peroxisome inheritance as class V myosin receptors.

Authors:  Jinlan Chang; Fred D Mast; Andrei Fagarasanu; Dorian A Rachubinski; Gary A Eitzen; Joel B Dacks; Richard A Rachubinski
Journal:  J Cell Biol       Date:  2009-10-12       Impact factor: 10.539

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