Literature DB >> 19187785

Rapid diagnosis of turbot reddish body iridovirus in turbot using the loop-mediated isothermal amplification method.

Qingli Zhang1, Chenyin Shi, Jie Huang, Kuntong Jia, Xinhua Chen, Hong Liu.   

Abstract

Turbot reddish body iridovirus (TRBIV) is a new piscine iridovirus that infects the turbot, Scophthalmus maximus, cultured in northern China and can cause high mortality. In this study, a loop-mediated isothermal amplification (LAMP) method was developed for the specific detection of this virus using primers designed from an Msp I restriction DNA fragment of the TRBIV genome. Mg(2+) concentrations, the reaction temperature, and the reaction time of LAMP were optimized to 6mM, 65 degrees C, and 60 min, respectively. The detection limit of the LAMP method was as low as seven copies and was 100 times more sensitive than the conventional PCR technique. Visual inspection of LAMP amplifications demonstrated that the positive and negative reactions exhibit distinct and different colors in daylight, which means that gel electrophoresis is not necessary to judge the presence or absence of the virus. LAMP can be conducted in 1h and requires only a simple heating device for incubation. Thus, the LAMP-TRBIV detection protocol has great potential for use in the detection of TRBIV in both the laboratory and the farm.

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Year:  2009        PMID: 19187785     DOI: 10.1016/j.jviromet.2009.01.008

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  7 in total

1.  Detection of HbsAg and hATIII genetically modified goats (Caprahircus) by loop-mediated isothermal amplification.

Authors:  Chenyu Tao; Qingde Zhang; Shanli Zhai; Bang Liu
Journal:  Mol Biol Rep       Date:  2013-09-22       Impact factor: 2.316

2.  Rapid and Sensitive Detection of Lymphocystis Disease Virus Genotype VII by Loop-Mediated Isothermal Amplification.

Authors:  Estefanía J Valverde; Irene Cano; Dolores Castro; Richard K Paley; Juan J Borrego
Journal:  Food Environ Virol       Date:  2016-10-05       Impact factor: 2.778

3.  A one-step reverse transcription loop-mediated isothermal amplification for detection and discrimination of infectious bursal disease virus.

Authors:  Yongqiang Wang; Zhonghui Kang; Honglei Gao; Yulong Gao; Liting Qin; Huan Lin; Fei Yu; Xiaole Qi; Xiaomei Wang
Journal:  Virol J       Date:  2011-03-08       Impact factor: 4.099

4.  High-density genetic linkage mapping in turbot (Scophthalmus maximus L.) based on SNP markers and major sex- and growth-related regions detection.

Authors:  Weiji Wang; Yulong Hu; Yu Ma; Liyong Xu; Jiantao Guan; Jie Kong
Journal:  PLoS One       Date:  2015-03-16       Impact factor: 3.240

Review 5.  Colorimetric biosensors for point-of-care virus detections.

Authors:  Victoria Xin Ting Zhao; Ten It Wong; Xin Ting Zheng; Yen Nee Tan; Xiaodong Zhou
Journal:  Mater Sci Energy Technol       Date:  2019-10-23

Review 6.  Megalocytiviruses in ornamental fish: A review.

Authors:  Che Azarulzaman Che Johan; Sandra Catherine Zainathan
Journal:  Vet World       Date:  2020-11-30

7.  A loop-mediated isothermal amplification assay for rapid detection of cyprinid herpesvirus 2 in gibel carp (Carassius auratus gibelio).

Authors:  Hui Zhang; Lingbing Zeng; Yuding Fan; Yong Zhou; Jin Xu; Jie Ma
Journal:  ScientificWorldJournal       Date:  2014-01-19
  7 in total

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