Literature DB >> 19185722

Pexophagy in Hansenula polymorpha.

Tim van Zutphen1, Ida J van der Klei, Jan A K W Kiel.   

Abstract

In the yeast Hansenula polymorpha the development and turnover of peroxisomes is readily achieved by manipulation of the cultivation conditions. The organelles massively develop when the cells are incubated in the presence of methanol as the sole source of carbon and energy. However, they are rapidly and selectively degraded when methanol-grown cells are placed at conditions of repression of methanol metabolism (e.g. in glucose or ethanol excess conditions) by a process termed macropexophagy. Degradation of peroxisomes is also observed when the cells are placed at nitrogen-depletion conditions (microautophagy). This contribution details the methodologies that are currently in use investigating macropexophagy and microautophagy in H. polymorpha. Emphasis is placed on various structural (fluorescence microscopy, electron microscopy) and biochemical (specific enzyme activity measurements, Western blotting) approaches.

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Year:  2008        PMID: 19185722     DOI: 10.1016/S0076-6879(08)03214-X

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  9 in total

Review 1.  Pexophagy in yeast and mammals: an update on mysteries.

Authors:  Tanja Eberhart; Werner J Kovacs
Journal:  Histochem Cell Biol       Date:  2018-09-21       Impact factor: 4.304

Review 2.  Molecular mechanism and physiological role of pexophagy.

Authors:  Ravi Manjithaya; Taras Y Nazarko; Jean-Claude Farré; Suresh Subramani
Journal:  FEBS Lett       Date:  2010-01-17       Impact factor: 4.124

3.  The ubiquitous distribution of late embryogenesis abundant proteins across cell compartments in Arabidopsis offers tailored protection against abiotic stress.

Authors:  Adrien Candat; Gaël Paszkiewicz; Martine Neveu; Romain Gautier; David C Logan; Marie-Hélène Avelange-Macherel; David Macherel
Journal:  Plant Cell       Date:  2014-07-08       Impact factor: 11.277

Review 4.  Post-translational modifications of proteins associated with yeast peroxisome membrane: An essential mode of regulatory mechanism.

Authors:  Terence Infant; Rachayeeta Deb; Suchetana Ghose; Shirisha Nagotu
Journal:  Genes Cells       Date:  2021-09-02       Impact factor: 2.300

Review 5.  Regulation of Peroxisome Homeostasis by Post-Translational Modification in the Methylotrophic Yeast Komagataella phaffii.

Authors:  Shin Ohsawa; Masahide Oku; Hiroya Yurimoto; Yasuyoshi Sakai
Journal:  Front Cell Dev Biol       Date:  2022-04-19

6.  Regulation of autophagy by glucose in Mammalian cells.

Authors:  Félix Moruno; Eva Pérez-Jiménez; Erwin Knecht
Journal:  Cells       Date:  2012-07-27       Impact factor: 6.600

Review 7.  Glycosome biogenesis in trypanosomes and the de novo dilemma.

Authors:  Sarah Bauer; Meredith T Morris
Journal:  PLoS Negl Trop Dis       Date:  2017-04-20

8.  Adaptation of Hansenula polymorpha to methanol: a transcriptome analysis.

Authors:  Tim van Zutphen; Richard J S Baerends; Kim A Susanna; Anne de Jong; Oscar P Kuipers; Marten Veenhuis; Ida J van der Klei
Journal:  BMC Genomics       Date:  2010-01-04       Impact factor: 3.969

9.  Identification of phosphorylation sites in Hansenula polymorpha Pex14p by mass spectrometry.

Authors:  Katsuhiro Tanaka; Maiko Soeda; Yoichiro Hashimoto; Shigeo Takenaka; Masayuki Komori
Journal:  FEBS Open Bio       Date:  2012-11-12       Impact factor: 2.693

  9 in total

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