Literature DB >> 19178142

Observation of beta-sheet aggregation in a gas-phase tau-peptide dimer.

Timothy D Vaden1, Sally A N Gowers, Lavina C Snoek.   

Abstract

In Alzheimer's disease, the tau protein forms intracellular amyloid fibrils in which the (306)VQIVYK(311) sequence adopts parallel beta-sheets, enabling fibril formation via cross-beta "steric zippers". We investigated aggregation of the protected segment (Ac-VQIVYK-NHMe) using IR/UV hole-burning spectroscopy in the NH stretch region in a cold molecular beam combined with DFT calculations in order to characterize its structure and identify the noncovalent interactions generally responsible for aggregation and stabilization in amyloid peptides. The computed and experimental IR spectra suggest that the tau-protein fragments form extended beta-strands that are combined in a beta-sheet through characteristic backbone hydrogen bonds, indicating that this secondary structure is energetically most attractive and readily forms in the gas phase, without any "guiding" interactions from a solvent or protein environment.

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Year:  2009        PMID: 19178142     DOI: 10.1021/ja807760d

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  7 in total

1.  The mechanism of antiparallel β-sheet formation based on conditioned self-avoiding walk.

Authors:  Boon Chong Goh; Hon Wai Leong; Xiaohui Qu; Lock Yue Chew
Journal:  Eur Phys J E Soft Matter       Date:  2012-04-18       Impact factor: 1.890

2.  The IDP-Specific Force Field ff14IDPSFF Improves the Conformer Sampling of Intrinsically Disordered Proteins.

Authors:  Dong Song; Ray Luo; Hai-Feng Chen
Journal:  J Chem Inf Model       Date:  2017-05-04       Impact factor: 4.956

Review 3.  Structural evaluations of tau protein conformation: methodologies and approaches.

Authors:  Nicole L Zabik; Matthew M Imhof; Sanela Martic-Milne
Journal:  Biochem Cell Biol       Date:  2017-03-09       Impact factor: 3.626

4.  Comparison of β-sheets of capped polyalanine with those of the tau-amyloid structures VQIVYK and VQIINK. A density functional theory study.

Authors:  Joshua A Plumley; J J Dannenberg
Journal:  J Phys Chem B       Date:  2011-08-11       Impact factor: 2.991

Review 5.  Nanoparticles and colloids as contributing factors in neurodegenerative disease.

Authors:  Stephen C Bondy
Journal:  Int J Environ Res Public Health       Date:  2011-06-14       Impact factor: 3.390

6.  Formation of Neutral Peptide Aggregates as Studied by Mass-Selective IR Action Spectroscopy.

Authors:  Sjors Bakels; Sebastiaan B A Porskamp; Anouk M Rijs
Journal:  Angew Chem Int Ed Engl       Date:  2019-06-28       Impact factor: 15.336

Review 7.  Gas-Phase Infrared Spectroscopy of Neutral Peptides: Insights from the Far-IR and THz Domain.

Authors:  Sjors Bakels; Marie-Pierre Gaigeot; Anouk M Rijs
Journal:  Chem Rev       Date:  2020-02-19       Impact factor: 60.622

  7 in total

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