Literature DB >> 19161848

Analysis of mRNA decay in Bacillus subtilis.

David H Bechhofer1, Irina A Oussenko, Gintaras Deikus, Shiyi Yao, Nathalie Mathy, Ciarán Condon.   

Abstract

Studies of mRNA turnover in B. subtilis are less well known than in E. coli. Here we provide researchers who have an interest in gram-positive RNA processing with several protocols for RNA isolation, for 5'- and 3'-mapping of mRNAs and mRNA decay fragments, and we also include a comprehensive listing of B. subtilis mutants that are deficient in ribonucleases thought to be involved in mRNA decay.

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Year:  2008        PMID： 19161848     DOI： 10.1016/S0076-6879(08)02214-3

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN： 0076-6879            Impact factor:   1.600


  21 in total

1.  Interaction of Bacillus subtilis Polynucleotide Phosphorylase and RNase Y: STRUCTURAL MAPPING AND EFFECT ON mRNA TURNOVER.

Authors:  Elizabeth Salvo; Shanique Alabi; Bo Liu; Avner Schlessinger; David H Bechhofer
Journal:  J Biol Chem       Date:  2016-01-21       Impact factor: 5.157

2.  Maturation of 23S rRNA in Bacillus subtilis in the absence of Mini-III.

Authors:  Yulia Redko; Ciarán Condon
Journal:  J Bacteriol       Date:  2010-01       Impact factor: 3.490

3.  SCO5745, a bifunctional RNase J ortholog, affects antibiotic production in Streptomyces coelicolor.

Authors:  Patricia Bralley; Madiha Aseem; George H Jones
Journal:  J Bacteriol       Date:  2014-01-10       Impact factor: 3.490

4.  Small stable RNA maturation and turnover in Bacillus subtilis.

Authors:  Laetitia Gilet; Jeanne M DiChiara; Sabine Figaro; David H Bechhofer; Ciarán Condon
Journal:  Mol Microbiol       Date:  2014-12-19       Impact factor: 3.501

5.  Use of the chinchilla model for nasopharyngeal colonization to study gene expression by Moraxella catarrhalis.

Authors:  Todd C Hoopman; Wei Liu; Stephanie N Joslin; Christine Pybus; Jennifer L Sedillo; Maria Labandeira-Rey; Cassie A Laurence; Wei Wang; James A Richardson; Lauren O Bakaletz; Eric J Hansen
Journal:  Infect Immun       Date:  2011-12-19       Impact factor: 3.441

6.  Rae1/YacP, a new endoribonuclease involved in ribosome-dependent mRNA decay in Bacillus subtilis.

Authors:  Magali Leroy; Jérémie Piton; Laetitia Gilet; Olivier Pellegrini; Caroline Proux; Jean-Yves Coppée; Sabine Figaro; Ciarán Condon
Journal:  EMBO J       Date:  2017-03-31       Impact factor: 11.598

7.  An RNA pyrophosphohydrolase triggers 5'-exonucleolytic degradation of mRNA in Bacillus subtilis.

Authors:  Jamie Richards; Quansheng Liu; Olivier Pellegrini; Helena Celesnik; Shiyi Yao; David H Bechhofer; Ciarán Condon; Joel G Belasco
Journal:  Mol Cell       Date:  2011-09-16       Impact factor: 17.970

8.  CsfG, a sporulation-specific, small non-coding RNA highly conserved in endospore formers.

Authors:  Antonin Marchais; Sandra Duperrier; Sylvain Durand; Daniel Gautheret; Patrick Stragier
Journal:  RNA Biol       Date:  2011-05-01       Impact factor: 4.652

9.  Identification of an outer membrane lipoprotein involved in nasopharyngeal colonization by Moraxella catarrhalis in an animal model.

Authors:  Wei Wang; Stephanie N Joslin; Christine Pybus; Amanda S Evans; Flora Lichaa; Chad A Brautigam; Eric J Hansen
Journal:  Infect Immun       Date:  2014-03-18       Impact factor: 3.441

10.  Degradation of nanoRNA is performed by multiple redundant RNases in Bacillus subtilis.

Authors:  Ming Fang; Wencke-Maria Zeisberg; Ciaran Condon; Vasily Ogryzko; Antoine Danchin; Undine Mechold
Journal:  Nucleic Acids Res       Date:  2009-06-24       Impact factor: 16.971
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