Literature DB >> 19159297

Tightly connected water wires facilitate fast proton uptake at the proton entrance of proton pumping proteins.

Wei Gu1, Volkhard Helms.   

Abstract

Tightly connected water wires (TCW) exist in systems with nonconfined water like the solvated membrane proton pump system. The TCWs that connect to the negatively charged proton entrance facilitate the fast proton uptake of the proton pump. They function as a direct proton bridge or/and stabilizer of protons within the Coulomb cage of the proton entrance. Negatively charged residue(s) at the proton entrance induce a large population of long TCWs. Additional negatively charged residues increase the population of such long TCWs and, thus, raise the possibility to capture proton from the solution.

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Year:  2009        PMID: 19159297     DOI: 10.1021/ja809301w

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  6 in total

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Journal:  Biochemistry       Date:  2011-03-21       Impact factor: 3.162

2.  Hydrogen-bonded networks along and bifurcation of the E-pathway in quinol:fumarate reductase.

Authors:  Elena Herzog; Wei Gu; Hanno D Juhnke; Alexander H Haas; Werner Mäntele; Jörg Simon; Volkhard Helms; C Roy D Lancaster
Journal:  Biophys J       Date:  2012-09-19       Impact factor: 4.033

3.  Classical Molecular Dynamics with Mobile Protons.

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Journal:  J Chem Inf Model       Date:  2017-11-14       Impact factor: 4.956

Review 4.  Subunit III-depleted cytochrome c oxidase provides insight into the process of proton uptake by proteins.

Authors:  Lakshman Varanasi; Jonathan P Hosler
Journal:  Biochim Biophys Acta       Date:  2011-10-14

5.  Arrangement of water molecules and high proton conductivity of tunnel structure phosphates, KMg1-x H2x (PO3)3·yH2O.

Authors:  Yasuaki Matsuda; Kousei Funakoshi; Ryosuke Sebe; Genki Kobayashi; Masao Yonemura; Nobuyuki Imanishi; Daisuke Mori; Shinya Higashimoto
Journal:  RSC Adv       Date:  2020-02-24       Impact factor: 3.361

6.  Human cellular retinaldehyde-binding protein has secondary thermal 9-cis-retinal isomerase activity.

Authors:  Christin S Bolze; Rachel E Helbling; Robin L Owen; Arwen R Pearson; Guillaume Pompidor; Florian Dworkowski; Martin R Fuchs; Julien Furrer; Marcin Golczak; Krzysztof Palczewski; Michele Cascella; Achim Stocker
Journal:  J Am Chem Soc       Date:  2013-12-20       Impact factor: 15.419

  6 in total

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