Literature DB >> 19157078

Determining the conformational stability of a protein using urea denaturation curves.

Kevin L Shaw1, J Martin Scholtz, C Nick Pace, Gerald R Grimsley.   

Abstract

The stability of globular proteins is an important factor in determining their usefulness in basic research and medicine. A number of environmental factors contribute to the conformational stability of a protein, including pH, temperature, and ionic strength. In addition, variants of proteins may show remarkable differences in stability from their wild-type form. In this chapter, we describe the method and analysis of urea denaturation curves to determine the conformational stability of a protein. This involves relatively simple experiments that can be done in a typical biochemistry laboratory, especially when using ordinary spectroscopic techniques to follow unfolding.

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Year:  2009        PMID: 19157078     DOI: 10.1007/978-1-59745-367-7_2

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  9 in total

1.  Thermal stability of glucokinase (GK) as influenced by the substrate glucose, an allosteric glucokinase activator drug (GKA) and the osmolytes glycerol and urea.

Authors:  B Zelent; C Buettger; J Grimsby; R Sarabu; J M Vanderkooi; A J Wand; F M Matschinsky
Journal:  Biochim Biophys Acta       Date:  2012-03-16

2.  Using a second-order differential model to fit data without baselines in protein isothermal chemical denaturation.

Authors:  Chuanning Tang; Scott Lew; Dacheng He
Journal:  Protein Sci       Date:  2016-02-11       Impact factor: 6.725

3.  Protein domain definition should allow for conditional disorder.

Authors:  Kavestri Yegambaram; Esther M M Bulloch; Richard L Kingston
Journal:  Protein Sci       Date:  2013-09-20       Impact factor: 6.725

4.  Increasing protein stability by improving beta-turns.

Authors:  Hailong Fu; Gerald R Grimsley; Abbas Razvi; J Martin Scholtz; C Nick Pace
Journal:  Proteins       Date:  2009-11-15

5.  Loop Electrostatics Asymmetry Modulates the Preexisting Conformational Equilibrium in Thrombin.

Authors:  Nicola Pozzi; Mirco Zerbetto; Laura Acquasaliente; Simone Tescari; Diego Frezzato; Antonino Polimeno; David W Gohara; Enrico Di Cera; Vincenzo De Filippis
Journal:  Biochemistry       Date:  2016-07-06       Impact factor: 3.162

6.  Fusion with anticodon binding domain of GluRS is not sufficient to alter the substrate specificity of a chimeric Glu-Q-RS.

Authors:  Sutapa Ray; Mickael Blaise; Bappaditya Roy; Saptaparni Ghosh; Daniel Kern; Rajat Banerjee
Journal:  Protein J       Date:  2014-02       Impact factor: 2.371

7.  Structural, thermodynamic, and phosphatidylinositol 3-phosphate binding properties of Phafin2.

Authors:  Tuo-Xian Tang; Ami Jo; Jingren Deng; Jeffrey F Ellena; Iulia M Lazar; Richey M Davis; Daniel G S Capelluto
Journal:  Protein Sci       Date:  2017-02-13       Impact factor: 6.725

Review 8.  Is Protein Folding a Thermodynamically Unfavorable, Active, Energy-Dependent Process?

Authors:  Irina Sorokina; Arcady R Mushegian; Eugene V Koonin
Journal:  Int J Mol Sci       Date:  2022-01-04       Impact factor: 5.923

9.  Mutations in the KDM5C ARID Domain and Their Plausible Association with Syndromic Claes-Jensen-Type Disease.

Authors:  Yunhui Peng; Jimmy Suryadi; Ye Yang; Tugba G Kucukkal; Weiguo Cao; Emil Alexov
Journal:  Int J Mol Sci       Date:  2015-11-13       Impact factor: 5.923

  9 in total

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