Literature DB >> 19154017

Efficient global representations of potential energy functions: trajectory calculations of bimolecular gas-phase reactions by multiconfiguration molecular mechanics.

Oksana Tishchenko1, Donald G Truhlar.   

Abstract

Multiconfiguration molecular mechanics (MCMM) was previously applied to calculate potential energies, gradients, and Hessians along a reaction path and in the large-curvature tunneling swath, and it was shown that one could calculate variational transition state theory rate constants with optimized multidimensional tunneling without requiring more than a few electronic structure Hessians. It was also used for molecular dynamics simulations of liquid-phase potentials of mean force as functions of a reaction coordinate. In the present article we present some improvements to the formalism and also show that with these improvements we can use the method for the harder problem of trajectory calculations on gas-phase bimolecular reactive collisions. In particular, we apply the MCMM algorithm to the model reaction OH + H(2) --> H(2)O + H, for which we construct the global full-dimensional interpolated potential energy surfaces with various numbers of electronic structure Hessians and various molecular mechanics force fields, and we assess the quality of these fits by quasiclassical trajectory calculations. We demonstrate that chemical accuracy (1-2 kcal/mol) can be reached for a MCMM potential in dynamically important regions with a fairly small number of electronic structure Hessians. We also discuss the origins of the errors in the interpolated energies and a possible way to improve the accuracy.

Entities:  

Year:  2009        PMID: 19154017     DOI: 10.1063/1.3042145

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  2 in total

1.  Application of Q2MM to predictions in stereoselective synthesis.

Authors:  Anthony R Rosales; Taylor R Quinn; Jessica Wahlers; Anna Tomberg; Xin Zhang; Paul Helquist; Olaf Wiest; Per-Ola Norrby
Journal:  Chem Commun (Camb)       Date:  2018-07-24       Impact factor: 6.222

2.  Concerted hydrogen atom and electron transfer mechanism for catalysis by lysine-specific demethylase.

Authors:  Tao Yu; Masahiro Higashi; Alessandro Cembran; Jiali Gao; Donald G Truhlar
Journal:  J Phys Chem B       Date:  2013-06-14       Impact factor: 2.991

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.