Literature DB >> 19153253

The strength of selection against the yeast prion [PSI+].

Joanna Masel1, Cortland K Griswold.   

Abstract

The [PSI(+)] prion causes widespread readthrough translation and is rare in natural populations of Saccharomyces, despite the fact that sex is expected to cause it to spread. Using the recently estimated rate of Saccharomyces outcrossing, we calculate the strength of selection necessary to maintain [PSI(+)] at levels low enough to be compatible with data. Using the best available parameter estimates, we find selection against [PSI(+)] to be significant. Inference regarding selection on modifiers of [PSI(+)] appearance depends on obtaining more precise and accurate estimates of the product of yeast effective population size N(e) and the spontaneous rate of [PSI(+)] appearance m. The ability to form [PSI(+)] has persisted in yeast over a long period of evolutionary time, despite a diversity of modifiers that could abolish it. If mN(e) < 1, this may be explained by insufficiently strong selection. If mN(e) > 1, then selection should favor the spread of [PSI(+)] resistance modifiers. In this case, rare conditions where [PSI(+)] is adaptive may permit its persistence in the face of negative selection.

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Year:  2009        PMID: 19153253      PMCID: PMC2651042          DOI: 10.1534/genetics.108.100297

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  31 in total

1.  Evidence for a protein mutator in yeast: role of the Hsp70-related chaperone ssb in formation, stability, and toxicity of the [PSI] prion.

Authors:  Y O Chernoff; G P Newnam; J Kumar; K Allen; A D Zink
Journal:  Mol Cell Biol       Date:  1999-12       Impact factor: 4.272

2.  The evolution of bet-hedging adaptations to rare scenarios.

Authors:  Oliver D King; Joanna Masel
Journal:  Theor Popul Biol       Date:  2007-08-31       Impact factor: 1.570

3.  Effects of the [PSI+] prion on rates of adaptation in yeast.

Authors:  S B Joseph; M Kirkpatrick
Journal:  J Evol Biol       Date:  2008-02-29       Impact factor: 2.411

4.  The conversion of 3' UTRs into coding regions.

Authors:  Michael G Giacomelli; Adam S Hancock; Joanna Masel
Journal:  Mol Biol Evol       Date:  2006-11-10       Impact factor: 16.240

5.  Functionally redundant isoforms of a yeast Hsp70 chaperone subfamily have different antiprion effects.

Authors:  Deepak Sharma; Daniel C Masison
Journal:  Genetics       Date:  2008-06-18       Impact factor: 4.562

6.  Estimating the per-base-pair mutation rate in the yeast Saccharomyces cerevisiae.

Authors:  Gregory I Lang; Andrew W Murray
Journal:  Genetics       Date:  2008-01       Impact factor: 4.562

7.  Population genomics of the wild yeast Saccharomyces paradoxus: Quantifying the life cycle.

Authors:  Isheng J Tsai; Douda Bensasson; Austin Burt; Vassiliki Koufopanou
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-14       Impact factor: 11.205

8.  A genome-wide view of the spectrum of spontaneous mutations in yeast.

Authors:  Michael Lynch; Way Sung; Krystalynne Morris; Nicole Coffey; Christian R Landry; Erik B Dopman; W Joseph Dickinson; Kazufusa Okamoto; Shilpa Kulkarni; Daniel L Hartl; W Kelley Thomas
Journal:  Proc Natl Acad Sci U S A       Date:  2008-06-26       Impact factor: 11.205

9.  Prion protein repeat expansion results in increased aggregation and reveals phenotypic variability.

Authors:  Elizabeth M H Tank; David A Harris; Amar A Desai; Heather L True
Journal:  Mol Cell Biol       Date:  2007-06-04       Impact factor: 4.272

10.  Prion switching in response to environmental stress.

Authors:  Jens Tyedmers; Maria Lucia Madariaga; Susan Lindquist
Journal:  PLoS Biol       Date:  2008-11-25       Impact factor: 8.029

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  18 in total

1.  The spontaneous appearance rate of the yeast prion [PSI+] and its implications for the evolution of the evolvability properties of the [PSI+] system.

Authors:  Alex K Lancaster; J Patrick Bardill; Heather L True; Joanna Masel
Journal:  Genetics       Date:  2009-11-16       Impact factor: 4.562

Review 2.  The tip of the iceberg: RNA-binding proteins with prion-like domains in neurodegenerative disease.

Authors:  Oliver D King; Aaron D Gitler; James Shorter
Journal:  Brain Res       Date:  2012-01-21       Impact factor: 3.252

Review 3.  The [RNQ+] prion: a model of both functional and pathological amyloid.

Authors:  Kevin C Stein; Heather L True
Journal:  Prion       Date:  2011-10-01       Impact factor: 3.931

Review 4.  Strategies for identifying new prions in yeast.

Authors:  Kyle S MacLea; Eric D Ross
Journal:  Prion       Date:  2011-10-01       Impact factor: 3.931

Review 5.  Prions are affected by evolution at two levels.

Authors:  Reed B Wickner; Amy C Kelly
Journal:  Cell Mol Life Sci       Date:  2015-12-28       Impact factor: 9.261

Review 6.  More than Just a Phase: Prions at the Crossroads of Epigenetic Inheritance and Evolutionary Change.

Authors:  Anupam K Chakravarty; Daniel F Jarosz
Journal:  J Mol Biol       Date:  2018-07-19       Impact factor: 5.469

7.  Effect of domestication on the spread of the [PIN+] prion in Saccharomyces cerevisiae.

Authors:  Amy C Kelly; Ben Busby; Reed B Wickner
Journal:  Genetics       Date:  2014-05-08       Impact factor: 4.562

8.  Compositional determinants of prion formation in yeast.

Authors:  James A Toombs; Blake R McCarty; Eric D Ross
Journal:  Mol Cell Biol       Date:  2010-01       Impact factor: 4.272

Review 9.  Robustness: mechanisms and consequences.

Authors:  Joanna Masel; Mark L Siegal
Journal:  Trends Genet       Date:  2009-08-28       Impact factor: 11.639

10.  Sporadic distribution of prion-forming ability of Sup35p from yeasts and fungi.

Authors:  Herman K Edskes; Hima J Khamar; Chia-Lin Winchester; Alexandria J Greenler; Albert Zhou; Ryan P McGlinchey; Anton Gorkovskiy; Reed B Wickner
Journal:  Genetics       Date:  2014-07-31       Impact factor: 4.562

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