Literature DB >> 19152857

Fluorescence approaches to quantifying biomolecular interactions.

Catherine A Royer1, Suzanne F Scarlata.   

Abstract

This review is conceived as an introductory text to aid in the understanding and conception of fluorescence-based measurements of biomolecular interactions. The major fluorescence observables are introduced briefly. Next, the criteria that are involved in the choice of the fluorescent probe are discussed in terms of their advantages and disadvantages for different types of experiments. The last sections deal with the experimental design for fluorescence-based assays aimed at detecting different types of biomolecular interactions. Included in our examples are protein-ligand interactions, protein-nucleic acid interactions, aqueous phase protein-protein interactions and protein interactions in or at the cell membrane. We hope that this introduction will be of use to students and researchers considering the use of fluorescence in their work.

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Year:  2008        PMID: 19152857     DOI: 10.1016/S0076-6879(08)03405-8

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  34 in total

1.  Comparison between whole distribution- and average-based approaches to the determination of fluorescence resonance energy transfer efficiency in ensembles of proteins in living cells.

Authors:  Deo R Singh; Valerică Raicu
Journal:  Biophys J       Date:  2010-05-19       Impact factor: 4.033

2.  Structural and thermodynamic analysis of PDZ-ligand interactions.

Authors:  Tyson R Shepherd; Ernesto J Fuentes
Journal:  Methods Enzymol       Date:  2011       Impact factor: 1.600

Review 3.  Fluorescence anisotropy and resonance energy transfer: powerful tools for measuring real time protein dynamics in a physiological environment.

Authors:  Christopher M Yengo; Christopher L Berger
Journal:  Curr Opin Pharmacol       Date:  2010-10-23       Impact factor: 5.547

Review 4.  Quantitative approaches to monitor protein-nucleic acid interactions using fluorescent probes.

Authors:  John M Pagano; Carina C Clingman; Sean P Ryder
Journal:  RNA       Date:  2010-11-22       Impact factor: 4.942

5.  NMR line shapes and multi-state binding equilibria.

Authors:  Evgenii L Kovrigin
Journal:  J Biomol NMR       Date:  2012-05-20       Impact factor: 2.835

6.  Identification of protein-protein interaction inhibitors targeting vaccinia virus processivity factor for development of antiviral agents.

Authors:  Norbert Schormann; Charnell Inglis Sommers; Mark N Prichard; Kathy A Keith; James W Noah; Manunya Nuth; Robert P Ricciardi; Debasish Chattopadhyay
Journal:  Antimicrob Agents Chemother       Date:  2011-08-15       Impact factor: 5.191

7.  A Ratiometric and near-Infrared Fluorescent Probe for Imaging Cu2+ in Living Cells and Animals.

Authors:  Rui Guo; Qiuan Wang; Weiying Lin
Journal:  J Fluoresc       Date:  2017-04-19       Impact factor: 2.217

Review 8.  Fluorescent membrane probes' behavior in lipid bilayers: insights from molecular dynamics simulations.

Authors:  Luís M S Loura; J P Prates Ramalho
Journal:  Biophys Rev       Date:  2009-09-04

9.  Intrinsically disordered chromatin protein NUPR1 binds to the C-terminal region of Polycomb RING1B.

Authors:  Patricia Santofimia-Castaño; Bruno Rizzuti; Ángel L Pey; Philippe Soubeyran; Miguel Vidal; Raúl Urrutia; Juan L Iovanna; José L Neira
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-18       Impact factor: 11.205

10.  Applying 6-methylisoxanthopterin-enhanced fluorescence to examine protein-DNA interactions in the picomolar range.

Authors:  Andrew Moreno; Joseph Knee; Ishita Mukerji
Journal:  Biochemistry       Date:  2012-08-16       Impact factor: 3.162

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