Literature DB >> 19150398

Quantitative trait loci, genes, and polymorphisms that regulate bone mineral density in mouse.

Qing Xiong1, Yan Jiao, Karen A Hasty, S Terry Canale, John M Stuart, Wesley G Beamer, Hong-Wen Deng, David Baylink, Weikuan Gu.   

Abstract

This is an in silico analysis of data available from genome-wide scans. Through analysis of QTL, genes and polymorphisms that regulate BMD, we identified 82 BMD QTL, 191 BMD-associated (BMDA) genes, and 83 genes containing known BMD-associated polymorphisms (BMDAP). The catalogue of all BMDA/BMDAP genes and relevant literatures are provided. In total, there are substantially more BMDA/BMDAP genes in regions of the genome where QTL have been identified than in non-QTL regions. Among 191 BMDA genes and 83 BMDAP genes, 133 and 58 are localized in QTL regions, respectively. The difference was still noticeable for the chromosome distribution of these genes between QTL and non-QTL regions. These results have allowed us to generate an integrative profile of QTL, genes, polymorphisms that determine BMD. These data could facilitate more rapid and comprehensive identification of causal genes underlying the determination of BMD in mouse and provide new insights into how BMD is regulated in humans.

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Year:  2009        PMID: 19150398      PMCID: PMC2901167          DOI: 10.1016/j.ygeno.2008.12.008

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  207 in total

1.  Growth hormone predicts bone density in elderly women.

Authors:  E M Dennison; P C Hindmarsh; S Kellingray; C H D Fall; C Cooper
Journal:  Bone       Date:  2003-04       Impact factor: 4.398

2.  A common methylenetetrahydrofolate reductase (C677T) polymorphism is associated with low bone mineral density and increased fracture incidence after menopause: longitudinal data from the Danish osteoporosis prevention study.

Authors:  Bo Abrahamsen; Jonna Skov Madsen; Charlotte Landbo Tofteng; Lis Stilgren; Else Marie Bladbjerg; Søren Risom Kristensen; Kim Brixen; Leif Mosekilde
Journal:  J Bone Miner Res       Date:  2003-04       Impact factor: 6.741

3.  A thyrotoxic skeletal phenotype of advanced bone formation in mice with resistance to thyroid hormone.

Authors:  Patrick J O'Shea; Clare B Harvey; Hideyo Suzuki; Masahiro Kaneshige; Kumiko Kaneshige; Sheue-Yann Cheng; Graham R Williams
Journal:  Mol Endocrinol       Date:  2003-04-03

4.  Relationship between bone mineral density and angiotensin converting enzyme polymorphism in hypertensive postmenopausal women.

Authors:  José Luis Pérez-Castrillón; Isabel Justo; Jesús Silva; Alberto Sanz; Juan Carlos Martín-Escudero; Rosa Igea; Pilar Escudero; Carol Pueyo; Cristina Diaz; Gonzalo Hernández; Antonio Dueñas
Journal:  Am J Hypertens       Date:  2003-03       Impact factor: 2.689

5.  Polymorphisms in the transforming growth factor beta 1 gene and osteoporosis.

Authors:  Bente Lomholt Langdahl; Mette Carstens; Liselotte Stenkjaer; Erik Fink Eriksen
Journal:  Bone       Date:  2003-03       Impact factor: 4.398

6.  Targeted deletion of histidine decarboxylase gene in mice increases bone formation and protects against ovariectomy-induced bone loss.

Authors:  L A Fitzpatrick; E Buzas; T J Gagne; A Nagy; C Horvath; V Ferencz; A Mester; B Kari; M Ruan; A Falus; J Barsony
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-25       Impact factor: 11.205

7.  Association of a haplotype (196Phe/532Ser) in the interleukin-1-receptor-associated kinase (IRAK1) gene with low radial bone mineral density in two independent populations.

Authors:  Ryota Ishida; Mitsuru Emi; Yoichi Ezura; Hironori Iwasaki; Hideyo Yoshida; Takao Suzuki; Takayuki Hosoi; Satoshi Inoue; Masataka Shiraki; Hiromoto Ito; Hajime Orimo
Journal:  J Bone Miner Res       Date:  2003-03       Impact factor: 6.741

8.  Association of the -381T/C promoter variation of the brain natriuretic peptide gene with low bone-mineral density and rapid postmenopausal bone loss.

Authors:  Mitsuko Kajita; Yoichi Ezura; Hironori Iwasaki; Ryota Ishida; Hideyo Yoshida; Mina Kodaira; Takao Suzuki; Takayuki Hosoi; Satoshi Inoue; Masataka Shiraki; Hajime Orimo; Mitsuru Emi
Journal:  J Hum Genet       Date:  2003       Impact factor: 3.172

9.  Mesenchymal progenitor self-renewal deficiency leads to age-dependent osteoporosis in Sca-1/Ly-6A null mice.

Authors:  Mortaza Bonyadi; Stephen D Waldman; Danmei Liu; Jane E Aubin; Marc D Grynpas; William L Stanford
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-05       Impact factor: 11.205

10.  Association of interleukin-6 promoter variant with bone mineral density in pre-menopausal women.

Authors:  Hye Won Chung; Jeong-Sun Seo; Sung Eun Hur; Hyung Lae Kim; Jun Yeon Kim; Ji Hyun Jung; Lyoung Hyo Kim; Byung Lae Park; Hyoung Doo Shin
Journal:  J Hum Genet       Date:  2003-04-18       Impact factor: 3.172

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  18 in total

1.  Identification of quantitative trait loci influencing skeletal architecture in mice: emergence of Cdh11 as a primary candidate gene regulating femoral morphology.

Authors:  Charles R Farber; Scott A Kelly; Ethan Baruch; Daniel Yu; Kunjie Hua; Derrick L Nehrenberg; Fernando Pardo-Manuel de Villena; Ryan J Buus; Theodore Garland; Daniel Pomp
Journal:  J Bone Miner Res       Date:  2011-09       Impact factor: 6.741

2.  Congenic mice provide in vivo evidence for a genetic locus that modulates intrinsic transforming growth factor β1-mediated signaling and bone acquisition.

Authors:  Aditi Mukherjee; Emily A Larson; Amy S Carlos; John K Belknap; Peter Rotwein; Robert F Klein
Journal:  J Bone Miner Res       Date:  2012-06       Impact factor: 6.741

Review 3.  Sexual Dimorphism in Immunity to Oral Bacterial Diseases: Intersection of Neutrophil and Osteoclast Pathobiology.

Authors:  M S Valerio; K L Kirkwood
Journal:  J Dent Res       Date:  2018-09-11       Impact factor: 6.116

4.  Microarray analysis of human adipose-derived stem cells in three-dimensional collagen culture: osteogenesis inhibits bone morphogenic protein and Wnt signaling pathways, and cyclic tensile strain causes upregulation of proinflammatory cytokine regulators and angiogenic factors.

Authors:  Adisri Charoenpanich; Michelle E Wall; Charles J Tucker; Danica M K Andrews; David S Lalush; Elizabeth G Loboa
Journal:  Tissue Eng Part A       Date:  2011-07-18       Impact factor: 3.845

5.  In silico mapping of quantitative trait loci (QTL) regulating the milk ionome in mice identifies a milk iron locus on chromosome 1.

Authors:  Darryl L Hadsell; Louise A Hadsell; Monique Rijnkels; Yareli Carcamo-Bahena; Jerry Wei; Peter Williamson; Michael A Grusak
Journal:  Mamm Genome       Date:  2018-08-02       Impact factor: 2.957

6.  Osteopotentia regulates osteoblast maturation, bone formation, and skeletal integrity in mice.

Authors:  Michael L Sohaskey; Yebin Jiang; Jenny J Zhao; Andreas Mohr; Frank Roemer; Richard M Harland
Journal:  J Cell Biol       Date:  2010-05-03       Impact factor: 10.539

7.  Quantitative trait loci for bone mineral density and femoral morphology in an advanced intercross population of mice.

Authors:  Larry J Leamy; Scott A Kelly; Kunjie Hua; Charles R Farber; Daniel Pomp
Journal:  Bone       Date:  2013-02-26       Impact factor: 4.398

8.  Cyclic tensile strain enhances osteogenesis and angiogenesis in mesenchymal stem cells from osteoporotic donors.

Authors:  Adisri Charoenpanich; Michelle E Wall; Charles J Tucker; Danica M K Andrews; David S Lalush; Douglas R Dirschl; Elizabeth G Loboa
Journal:  Tissue Eng Part A       Date:  2013-09-19       Impact factor: 3.845

Review 9.  Genetics of osteoporosis: accelerating pace in gene identification and validation.

Authors:  Wen-Feng Li; Shu-Xun Hou; Bin Yu; Meng-Meng Li; Claude Férec; Jian-Min Chen
Journal:  Hum Genet       Date:  2009-12-12       Impact factor: 4.132

10.  How genomics has informed our understanding of the pathogenesis of osteoporosis.

Authors:  Mark L Johnson; Nuria Lara; Mohamed A Kamel
Journal:  Genome Med       Date:  2009-09-07       Impact factor: 11.117

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