Literature DB >> 19146820

A simple and loss-free method to remove TRIzol contaminations from minute RNA samples.

Stefan Krebs1, Marlis Fischaleck, Helmut Blum.   

Abstract

Acid guanidium phenol preparations such as TRIzol allow the reproducible isolation of high-quality total RNA from various sources. However, if applied to minimal sample sizes, the quality parameters of the isolated RNA are often low. Here we present an approach to improve the 260/280- and 230/260-nm ratios of such preparations as well as the ratio of the 18S/28S RNA. A simple extraction with 1-butanol eliminates smearing of the 28 S RNA and restores the characteristic ultraviolet (UV) spectrum of highly purified RNA. Application of the method is demonstrated for fluorescence-activated cell sorting (FACS)-sorted cells where the population of interest is often small.

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Year:  2008        PMID: 19146820     DOI: 10.1016/j.ab.2008.12.020

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  20 in total

1.  Side population cells of pancreatic cancer show characteristics of cancer stem cells responsible for resistance and metastasis.

Authors:  Hanno Niess; Peter Camaj; Andrea Renner; Ivan Ischenko; Yue Zhao; Stefan Krebs; Josef Mysliwietz; Carsten Jäckel; Peter J Nelson; Helmut Blum; Karl-Walter Jauch; Joachim W Ellwart; Christiane J Bruns
Journal:  Target Oncol       Date:  2014-06-22       Impact factor: 4.493

2.  Positive impact of dynamic seeding of mesenchymal stem cells on bone-like biodegradable scaffolds with increased content of calcium phosphate nanoparticles.

Authors:  Pavla Sauerova; Tomas Suchy; Monika Supova; Martin Bartos; Jiri Klima; Jana Juhasova; Stefan Juhas; Tereza Kubikova; Zbynek Tonar; Radek Sedlacek; Marco Piola; Gianfranco Beniamino Fiore; Monica Soncini; Marie Hubalek Kalbacova
Journal:  Mol Biol Rep       Date:  2019-06-10       Impact factor: 2.316

3.  Role of ketone signaling in the hepatic response to fasting.

Authors:  Caroline E Geisler; Susma Ghimire; Randy L Bogan; Benjamin J Renquist
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2019-02-15       Impact factor: 4.052

4.  Etv2 is expressed in the yolk sac hematopoietic and endothelial progenitors and regulates Lmo2 gene expression.

Authors:  Naoko Koyano-Nakagawa; Junghun Kweon; Michelina Iacovino; Xiaozhong Shi; Tara L Rasmussen; Luciene Borges; Katie M Zirbes; Tongbin Li; Rita C R Perlingeiro; Michael Kyba; Daniel J Garry
Journal:  Stem Cells       Date:  2012-08       Impact factor: 6.277

5.  Obesity dysregulates fasting-induced changes in glucagon secretion.

Authors:  Jennifer H Stern; Gordon I Smith; Shiuwei Chen; Roger H Unger; Samuel Klein; Philipp E Scherer
Journal:  J Endocrinol       Date:  2019-11       Impact factor: 4.286

6.  Magnesium transport in the aglomerular kidney of the Gulf toadfish (Opsanus beta).

Authors:  Nina G Walker Hansen; Steffen S Madsen; Melanie Brauckhoff; Rachael M Heuer; Lela S Schlenker; Morten B Engelund; Martin Grosell
Journal:  J Comp Physiol B       Date:  2021-07-23       Impact factor: 2.200

7.  The hypophagic response to heat stress is not mediated by GPR109A or peripheral β-OH butyrate.

Authors:  Chelsea Hepler; Caroline E Foy; Mark R Higgins; Benjamin J Renquist
Journal:  Am J Physiol Regul Integr Comp Physiol       Date:  2016-03-02       Impact factor: 3.619

8.  Biphasic Liquid Microjunction Extraction for Profiling Neuronal RNA Modifications by Liquid Chromatography-Tandem Mass Spectrometry.

Authors:  Kevin D Clark; Marina C Philip; Yanqi Tan; Jonathan V Sweedler
Journal:  Anal Chem       Date:  2020-08-27       Impact factor: 6.986

9.  The Cardiac TBX5 Interactome Reveals a Chromatin Remodeling Network Essential for Cardiac Septation.

Authors:  Lauren Waldron; Jeffrey D Steimle; Todd M Greco; Nicholas C Gomez; Kerry M Dorr; Junghun Kweon; Brenda Temple; Xinan Holly Yang; Caralynn M Wilczewski; Ian J Davis; Ileana M Cristea; Ivan P Moskowitz; Frank L Conlon
Journal:  Dev Cell       Date:  2016-02-08       Impact factor: 12.270

10.  A transgenic mouse line for collecting ribosome-bound mRNA using the tetracycline transactivator system.

Authors:  Laurel Drane; Joshua A Ainsley; Mark R Mayford; Leon G Reijmers
Journal:  Front Mol Neurosci       Date:  2014-10-29       Impact factor: 5.639

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