Literature DB >> 19141324

Genetic variation in the popular lab worm Lumbriculus variegatus (Annelida: Clitellata: Lumbriculidae) reveals cryptic speciation.

Daniel R Gustafsson1, David A Price, Christer Erséus.   

Abstract

Genetic variation in the freshwater oligochaete Lumbriculus variegatus from Europe, North America and Japan was studied by sequencing and analysing the mitochondrial 16S and COI genes, and the nuclear ITS region. What hitherto has been regarded as L. variegatus was found to consist of at least two distinct clades (I and II), both of which occur in Europe as well as North America (clade I also in Japan). Specimens from a single locality in Sierra Nevada, California, also morphologically identified as L. variegatus, represent a third clade, which appears to be more closely related to clade II than to clade I, based on 16S data only. Average COI genetic distances were 17.7% between clades I and II, 0.6% within clade I, and 1.3% within clade II. Further, for these two clades, the mitochondrial (16S and COI) gene trees, which consider only the maternal lineages, are congruent with the ITS gene tree, which is the result of recombinations of paternal as well as maternal genomes. Finally, chromosome counts revealed clade I specimens to be highly polyploid, and clade II specimens to be diploid. We therefore conclude that clades I-II are separately evolving lineages, and that they should be regarded as separate species. This will have to be taken into account in the continued use of L. variegatus as a model organism in biological sciences.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 19141324     DOI: 10.1016/j.ympev.2008.12.016

Source DB:  PubMed          Journal:  Mol Phylogenet Evol        ISSN: 1055-7903            Impact factor:   4.286


  10 in total

1.  Lumbriculus variegatus: A novel organism for in vivo pharmacology education.

Authors:  Aidan Seeley; Caitlin Bellamy; Nia A Davies; Melisa J Wallace
Journal:  Pharmacol Res Perspect       Date:  2021-10

2.  Using population genetic theory and DNA sequences for species detection and identification in asexual organisms.

Authors:  C William Birky; Joshua Adams; Marlea Gemmel; Julia Perry
Journal:  PLoS One       Date:  2010-05-13       Impact factor: 3.240

3.  Molecular barcoding of aquatic oligochaetes: implications for biomonitoring.

Authors:  Régis Vivien; Sofia Wyler; Michel Lafont; Jan Pawlowski
Journal:  PLoS One       Date:  2015-04-09       Impact factor: 3.240

4.  Next-Generation Sequencing of Aquatic Oligochaetes: Comparison of Experimental Communities.

Authors:  Régis Vivien; Franck Lejzerowicz; Jan Pawlowski
Journal:  PLoS One       Date:  2016-02-11       Impact factor: 3.240

5.  Cytochrome c oxidase barcodes for aquatic oligochaete identification: development of a Swiss reference database.

Authors:  Régis Vivien; Maria Holzmann; Inge Werner; Jan Pawlowski; Michel Lafont; Benoit J D Ferrari
Journal:  PeerJ       Date:  2017-12-06       Impact factor: 2.984

6.  High-throughput DNA barcoding of oligochaetes for abundance-based indices to assess the biological quality of sediments in streams and lakes.

Authors:  Régis Vivien; Laure Apothéloz-Perret-Gentil; Jan Pawlowski; Inge Werner; Michel Lafont; Benoit J D Ferrari
Journal:  Sci Rep       Date:  2020-02-06       Impact factor: 4.379

7.  DNA barcoding reveals cryptic diversity in the underestimated genus Triplophysa (Cypriniformes: Cobitidae, Nemacheilinae) from the northeastern Qinghai-Tibet Plateau.

Authors:  Tai Wang; Yan-Ping Zhang; Zhuo-Yu Yang; Zhe Liu; Yan-Yan Du
Journal:  BMC Evol Biol       Date:  2020-11-12       Impact factor: 3.260

Review 8.  It Cuts Both Ways: An Annelid Model System for the Study of Regeneration in the Laboratory and in the Classroom.

Authors:  Veronica G Martinez Acosta; Fausto Arellano-Carbajal; Kathy Gillen; Kay A Tweeten; Eduardo E Zattara
Journal:  Front Cell Dev Biol       Date:  2021-11-29

9.  Alike but different: the evolution of the Tubifex tubifex species complex (Annelida, Clitellata) through polyploidization.

Authors:  Roberto Marotta; Angelica Crottini; Elena Raimondi; Cristina Fondello; Marco Ferraguti
Journal:  BMC Evol Biol       Date:  2014-04-02       Impact factor: 3.260

10.  DNA barcoding of Naididae (Annelida, Oligochaeta), based on cytochrome C oxidase gene and ITS2 region in China.

Authors:  Tingting Zhou; Wei Jiang; Hongzhu Wang; Yongde Cui
Journal:  Biodivers Data J       Date:  2021-12-14
  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.