Literature DB >> 19140015

The ins and outs of biological zinc sites.

David S Auld1.   

Abstract

The inner shell coordination properties of zinc proteins have led to the identification of four types of zinc binding sites: catalytic, cocatalytic, structural, and protein interface. Outer shell coordination can influence the stability of the zinc site and its function as exemplified herein by the zinc sites in carbonic anhydrase, promatrix metalloproteases and alcohol dehydrogenase. Agents that disrupt these interactions, can lead to increased off rate constants for zinc. D: -penicillamine is the first drug to inhibit a zinc protease by catalyzing the removal of the metal. Since it can accept the released zinc we have referred to it as a catalytic chelator. Agents that catalyze the release of the metal in the presence of a scavenger chelator will also inhibit enzyme catalysis and are referred to as enhanced dechelation inhibitors.

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Year:  2009        PMID: 19140015     DOI: 10.1007/s10534-008-9184-1

Source DB:  PubMed          Journal:  Biometals        ISSN: 0966-0844            Impact factor:   2.949


  14 in total

1.  Epithelial barrier resistance is increased by the divalent cation zinc in cultured MDCKII epithelial monolayers.

Authors:  Georgina Carr; Jamie A Wright; Nicholas L Simmons
Journal:  J Membr Biol       Date:  2010-11-06       Impact factor: 1.843

2.  Methanethiol Binding Strengths and Deprotonation Energies in Zn(II)-Imidazole Complexes from M05-2X and MP2 Theories: Coordination Number and Geometry Influences Relevant to Zinc Enzymes.

Authors:  Douglas P Linder; Kenton R Rodgers
Journal:  J Phys Chem B       Date:  2015-09-04       Impact factor: 2.991

3.  A two-site mechanism for the inhibition of IAPP amyloidogenesis by zinc.

Authors:  Samer Salamekh; Jeffrey R Brender; Suk-Joon Hyung; Ravi Prakash Reddy Nanga; Subramanian Vivekanandan; Brandon T Ruotolo; Ayyalusamy Ramamoorthy
Journal:  J Mol Biol       Date:  2011-05-17       Impact factor: 5.469

Review 4.  The role of zinc and its compounds in leukemia.

Authors:  Alexey P Orlov; Marina A Orlova; Tatiana P Trofimova; Stepan N Kalmykov; Dmitry A Kuznetsov
Journal:  J Biol Inorg Chem       Date:  2018-02-28       Impact factor: 3.358

5.  Insights into Duffy binding-like domains through the crystal structure and function of the merozoite surface protein MSPDBL2 from Plasmodium falciparum.

Authors:  Anthony N Hodder; Peter E Czabotar; Alessandro D Uboldi; Oliver B Clarke; Clara S Lin; Julie Healer; Brian J Smith; Alan F Cowman
Journal:  J Biol Chem       Date:  2012-07-26       Impact factor: 5.157

6.  Conformational changes associated with the binding of zinc acetate at the putative active site of XcTcmJ, a cupin from Xanthomonas campestris pv. campestris.

Authors:  Herbert L Axelrod; Piotr Kozbial; Daniel McMullan; S Sri Krishna; Mitchell D Miller; Polat Abdubek; Claire Acosta; Tamara Astakhova; Dennis Carlton; Jonathan Caruthers; Hsiu Ju Chiu; Thomas Clayton; Marc C Deller; Lian Duan; Ylva Elias; Julie Feuerhelm; Slawomir K Grzechnik; Joanna C Grant; Gye Won Han; Lukasz Jaroszewski; Kevin K Jin; Heath E Klock; Mark W Knuth; Abhinav Kumar; David Marciano; Andrew T Morse; Kevin D Murphy; Edward Nigoghossian; Linda Okach; Silvya Oommachen; Jessica Paulsen; Ron Reyes; Christopher L Rife; Henry J Tien; Christina V Trout; Henry van den Bedem; Dana Weekes; Aprilfawn White; Qingping Xu; Chloe Zubieta; Keith O Hodgson; John Wooley; Marc André Elsliger; Ashley M Deacon; Adam Godzik; Scott A Lesley; Ian A Wilson
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-10-27

7.  Catalytic zinc site and mechanism of the metalloenzyme PR-AMP cyclohydrolase.

Authors:  Robert L D'Ordine; Rebecca S Linger; Carolyn J Thai; V Jo Davisson
Journal:  Biochemistry       Date:  2012-07-09       Impact factor: 3.162

8.  On the interactions among zinc availability and responses to ozone stress in durum wheat seedlings.

Authors:  Margherita G De Biasi; Rosita Marabottini; Anna Rita Paolacci; Mario Ciaffi; Cristina Nali; Giacomo Lorenzini; Maurizio Badiani
Journal:  Environ Sci Pollut Res Int       Date:  2017-10-10       Impact factor: 4.223

9.  Inhibition of the prokaryotic pentameric ligand-gated ion channel ELIC by divalent cations.

Authors:  Iwan Zimmermann; Alessandro Marabelli; Carlo Bertozzi; Lucia G Sivilotti; Raimund Dutzler
Journal:  PLoS Biol       Date:  2012-11-20       Impact factor: 8.029

10.  New insights about pilus formation in gut-adapted Lactobacillus rhamnosus GG from the crystal structure of the SpaA backbone-pilin subunit.

Authors:  Priyanka Chaurasia; Shivendra Pratap; Ingemar von Ossowski; Airi Palva; Vengadesan Krishnan
Journal:  Sci Rep       Date:  2016-06-28       Impact factor: 4.379

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